G220


Basic Information

Item Value
gene id G220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 98995 ~ 116801 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU266
tccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgccactccattctgcctgactctctgccactacattctgcctgactctctgccactacattctgttactccattctgcctgactctctgccactccagtctgcctgactctctgccactctattctgttactccattctgcctgactctctgccactccattctgttaccccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgaccctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccagtctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcctgactctttgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgcgactccattctgttactccattctgcctgactctctgccattcGATTCTGCATGACtttctgctactccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttttccattctgccagactctctgcttttccattctgccagactctctgcttttccattctgccagactctctgctactccattctgccagactctctgctactccattctgccagactctctgccactccattctgccagactctctgccactccattctgccagactctctgccactccattatgttactccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgccagactctctgccactccattctgccagactctctgc
>TU265
tccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgccactccattctgcctgactctctgccactacattctgcctgactctctgccactacattctgttactccattctgcctgactctctgccactccagtctgcctgactctctgccactctattctgttactccattctgcctgactctctgccactccattctgttaccccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgaccctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccagtctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcctgactctttgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgcgactccattctgttactccattctgcctgactctctgccattcGATTCTGCATGACtttctgctactccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttttccattctgccagactctctgcttttccattctgccagactctctgcttctccattctgccagactctctgccactccattctgcctgactctctgccactccattctgccagactctctgccactccattctgttactccattctgcctgactctttgCCACTCCATtatgttactccattctgccagactctctgccactccattctgttactccattctgccagactctctgccactccattctgccagactctctgccattcGATTCTGCatgactctctgctactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccagtctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcctgactctttgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccattcGATTCTGCATGACtttctgctactccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgccagactatctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttttccattctgccagactctctgctactccattctgccagactctctgccactccattctgccagactctctgccactccattctgcctgactctctgccactccattctgccagactctctgccactccattctgttactccattctgcctgactctttgCCACTCCATtatgttactccattctgccagaatctctgccactccattctgttactccattctgccagactctctgccactccattctgccagactctctgccattcGATTCTGCatgactctctgctactccattctgcctgactctctgccactccattctgttactccattctgccagactctctgccactccattctgccagactctctgccactccattctgccagactctctgccactccattctgccagactctctgccactccattctgcctgactctctgccactccattctgcctgactctctgctactccattctgccagactctctgctactccattctgccagactctctgccactcctccattctgcctgactctctgccactccattctgcctgactctctgccactccattcggcctgactctctgccactccattcggcctgactctctgccactccattcggcctgactctctgccactccattctgttactccattctgctttactctctgccactccattctgttaccccattctgcctgactctctgccactccattctgc

Function

NR:

description
PREDICTED: suprabasin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266 False 1140 lncRNA 0.36 2 98995 116801
TU265 True 2325 lncRNA 0.44 2 113022 116801

Neighbor

gene id symbol gene type direction distance location
sft2d2a sft2b coding upstream 120310 237111 ~ 243619 (-)
tmem45a tmem45a coding upstream 143563 260364 ~ 306047 (-)
LOC118964585 NA coding upstream 385951 502752 ~ 504254 (-)
plcxd1 LOC106574112 coding upstream 516485 631974 ~ 681917 (-)
LOC110520928 jade3 coding upstream 585725 702526 ~ 736791 (-)
G203 NA non-coding downstream 72756 25846 ~ 26239 (-)
G200 NA non-coding downstream 74687 23912 ~ 24308 (-)
G196 NA non-coding upstream 235 117036 ~ 120255 (-)
G231 NA non-coding upstream 56130 172931 ~ 173197 (-)
G262 NA non-coding upstream 96916 213717 ~ 215231 (-)
G319 NA non-coding upstream 181238 298039 ~ 298495 (-)
G292 NA non-coding upstream 194614 311415 ~ 314707 (-)
G202 NA other downstream 73322 25269 ~ 25673 (-)
G1355 NA other upstream 853384 970185 ~ 976099 (-)
G1651 LOC106574119 other upstream 1636444 1753245 ~ 1760430 (-)
G1788 NA other upstream 1975609 2092410 ~ 2097715 (-)

Expression


Co-expression Network