G196


Basic Information

Item Value
gene id G196
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 117036 ~ 120255 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU241
gccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgcttctccattctgccagactctctgctactccattctgccagactctctgccactccattctgccagactctctgccactccattctgcctgactctctgccactccattctgccagactctctgccactccattctgttgctccattctgcctgactctttgccactccattctgttactccattctgccagactctctgccactccattctgttactccattctgccagactctctgccactccattctgccagactctctgccattTGATTCTGCatgactctctgctactccattctgcctgactctctgccactccattctgttactccattctgccagactctctgccactccattctgccagactctctgccactccattctgccagactctctgccactccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgcctgactctctgctactccattctgccagactctctgctactccattctgccagactctctgccactcctccattctgcctgactctctgccactccattctgcctgactctctgccactccattcggcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcttgactctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgcctgactctctgccactccagtctgcctgactctctgccactccattctgttactccattcggcctgactctctgccactccatactgttactccattctgcctgactctctgccactccattctgcctgactctctgccactacattctgcctgactctctgccactacattctgttactccattctgcctgactctctgccactccattctgcctgactctctgccactacattctgcctgactctctgccactacattctgttactccattctgcctgactctctgccactccagtctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactctattctgttactccattctgcctgactctctgccactccattctgttaccccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgaccctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccagtctgcctgactctctgccactccattctgttactccattctgttactccattctgcctgactctctgccactccattcggcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcttgactctctgccactccattctgttaccccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgcctgactctctgccactccagtctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattcggcctgacaCTCTGCCACTCCATtctgcctgactctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccagtctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattcggcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcttgactctctgccactccattctgttaccccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgcctgactctgccactccagtctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattcggcctgacaCTCTGCCACTCCATACTGTTACTCCATTCTTACTGACTCTCTGCCacgccattctgcctgactctctgccactccattcggcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgcctgactctctgccactacattctgcctgactctctgccactacattctgttactccattctgcctgactctctgccactccagtctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactctattctgttactccattctgcctgactctctgccactccattctgttaccccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgaccctctgccactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccagtctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcctgactctttgccactccattctgttactccattctgcctgactctctgccactccattctgttactccattctgcctgactctctgccactccattctgcctgactctctgccactccattctgccagactctctgcttctccattctgccagact

Function

NR:

description
PREDICTED: suprabasin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241 True 3031 lncRNA 0.34 2 117036 120255

Neighbor

gene id symbol gene type direction distance location
sft2d2a sft2b coding upstream 116856 237111 ~ 243619 (-)
tmem45a tmem45a coding upstream 140109 260364 ~ 306047 (-)
LOC118964585 NA coding upstream 382497 502752 ~ 504254 (-)
plcxd1 LOC106574112 coding upstream 513031 631974 ~ 681917 (-)
LOC110520928 jade3 coding upstream 582271 702526 ~ 736791 (-)
G220 NA non-coding downstream 235 98995 ~ 116801 (-)
G203 NA non-coding downstream 90797 25846 ~ 26239 (-)
G200 NA non-coding downstream 92728 23912 ~ 24308 (-)
G231 NA non-coding upstream 52676 172931 ~ 173197 (-)
G262 NA non-coding upstream 93462 213717 ~ 215231 (-)
G319 NA non-coding upstream 177784 298039 ~ 298495 (-)
G292 NA non-coding upstream 191160 311415 ~ 314707 (-)
G290 NA non-coding upstream 197484 317739 ~ 321760 (-)
G202 NA other downstream 91363 25269 ~ 25673 (-)
G1355 NA other upstream 849930 970185 ~ 976099 (-)
G1651 LOC106574119 other upstream 1632990 1753245 ~ 1760430 (-)
G1788 NA other upstream 1972155 2092410 ~ 2097715 (-)

Expression


Co-expression Network