G72


Basic Information

Item Value
gene id G72
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 165619 ~ 165880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU108
acaagattatctggtctgatgaaaccaagattgaactctttggcctgaaagccaagcgtcacgtctggaggaatgctagcatcatccctacagtgaagcatggtggtggcagcatcatgctgtttttcagcggcagggactgggagactagtcaggatcgaggcaaagacgaatggagaaaagtacagagatccttgattttttttaaataacttgtccagagcactcaggacctcagaatggggtgaaagtataccttcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108 True 262 lncRNA 0.42 1 165619 165880

Neighbor

gene id symbol gene type direction distance location
LOC110532027 tomm70 coding downstream 218327 384207 ~ 421233 (+)
tbc1d23 tbc1d23 coding downstream 274085 439965 ~ 497128 (+)
nit2 nit2 coding downstream 436223 602103 ~ 617595 (+)
slc9a7 slc9a7 coding downstream 615960 781840 ~ 1244153 (+)
tubgcp5 tubgcp5 coding downstream 923516 1089396 ~ 1133908 (+)
G66 NA non-coding upstream 6859 151865 ~ 158760 (+)
G25 NA non-coding upstream 87319 55784 ~ 78300 (+)
G17 NA non-coding upstream 114341 46094 ~ 51278 (+)
G6 LOC106574160 non-coding upstream 126233 35450 ~ 39386 (+)
G13 NA non-coding upstream 137928 27301 ~ 27691 (+)
G160 NA non-coding downstream 141671 307551 ~ 307763 (+)
G166 NA non-coding downstream 152167 318047 ~ 319974 (+)
G183 NA non-coding downstream 196824 362704 ~ 363069 (+)
G184 NA non-coding downstream 198863 364743 ~ 365179 (+)
G345 NA non-coding downstream 209299 375179 ~ 375493 (+)
G51 NA other upstream 35356 120466 ~ 130263 (+)
G50 NA other upstream 45312 112959 ~ 120307 (+)
G26 NA other upstream 71901 56555 ~ 93718 (+)
G19 NA other upstream 93320 52711 ~ 72299 (+)
G583 NA other downstream 837903 1003783 ~ 1010207 (+)
G961 NA other downstream 1913018 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 2093003 2258883 ~ 2305334 (+)
G2016 NA other downstream 2478455 2644335 ~ 2645169 (+)

Expression


Co-expression Network