G231


Basic Information

Item Value
gene id G231
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 172931 ~ 173197 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU278
ATCGATTCGAGTTACTGTTGGAAACCAGTGGTAGACTAGGTCGTGTGGGTTAGCTGGTAGACTAGGTCGTGTGGGTTAGCTGGTAGACTAGGTCGTGTGGGTGTGGATTAGCTGTTAGACCAGGTCGTGTCACGCAGAGTTCATTTTTTTTCTCTGGTAGTCCTTATGTTCACAGAACTCCATGGAGCGTTTCACCTCATTGGTTTCACACAGATCATTCGGAACCCTGCTCTGCCTAAAC

Function

NR:

description
Nance-Horan syndrome protein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278 True 241 lncRNA 0.38 2 172931 173197

Neighbor

gene id symbol gene type direction distance location
sft2d2a sft2b coding upstream 63914 237111 ~ 243619 (-)
tmem45a tmem45a coding upstream 87167 260364 ~ 306047 (-)
LOC118964585 NA coding upstream 329555 502752 ~ 504254 (-)
plcxd1 LOC106574112 coding upstream 460089 631974 ~ 681917 (-)
LOC110520928 jade3 coding upstream 529329 702526 ~ 736791 (-)
G196 NA non-coding downstream 52676 117036 ~ 120255 (-)
G220 NA non-coding downstream 56130 98995 ~ 116801 (-)
G203 NA non-coding downstream 146692 25846 ~ 26239 (-)
G200 NA non-coding downstream 148623 23912 ~ 24308 (-)
G262 NA non-coding upstream 40520 213717 ~ 215231 (-)
G319 NA non-coding upstream 124842 298039 ~ 298495 (-)
G292 NA non-coding upstream 138218 311415 ~ 314707 (-)
G290 NA non-coding upstream 144542 317739 ~ 321760 (-)
G331 NA non-coding upstream 161155 334352 ~ 337594 (-)
G202 NA other downstream 147258 25269 ~ 25673 (-)
G1355 NA other upstream 796988 970185 ~ 976099 (-)
G1651 LOC106574119 other upstream 1580048 1753245 ~ 1760430 (-)
G1788 NA other upstream 1919213 2092410 ~ 2097715 (-)

Expression


Co-expression Network