G331


Basic Information

Item Value
gene id G331
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 334352 ~ 337594 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU393
tgtatgtactgtactcgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttatccccttacactgtgtacaagacagtagttttggaattgttagttagattacttgttattcctgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataacatttgatttgatttgatttgtgtggcTTCAGGCAGCTAGCGGCATGGGGCTAGCAGGCTAACAGAAAGTCTTTAGAGGGATGACGCGACGGAGGGAAGTCTGTTGTGGCCCCCTCGTGCAGTTACATCAGGGgacggatcagcagggctccgtgtggtaaaccaggccaattggcaaaatatgtaTAGTGGCCGAAGAAATATTTCCGAAGGGCCTCTCTCTctgctagcaggccgcagattagCGGCTGTGCATTCAAGGGTCGTTAGCTGCTATAATTCCAggtggaaaaaataaataaaaataatcataataaaaaatgtcataaaaaaaaaaaaatataggtTCAGAGCTTATGGTAAGAATAAGTCCGACtagctctggtttgagtcacgcTGTACAGACTAGCGAGAGTTGTCCGGGATAaaggtagctgatgaccgctagcaaagGATAGCTGACTGCTAGCTAGTGGCTTCGGTATGTATTCGATGGGCCTCGTAAGCCAACAGTCCGttgtgctctagacagctagcattCAGGGGATGTTAGCTGCGAAGTTCGGAAGGTGataaggttcagagcttgcgataggaatccggggatatggagagaaaaataggtccgtaTGCTCTGGTTGAAACGTGTTGtacaaactggcgagagctttccgagctagaGGTTAGCTGATGAtcgttagctggctagttagctggctagtttatgTTGGAGAGATTCCAGTAAGAGGCAAAGAAAAATACGTTAGAGAAAAAGCAGGTCCACACCACATTggatgaggcgggttgcaggagagtattttgaagtaagggtttagaaaaatataaaaagatatgcaaagaaaaatatacagtataaaaatgtatatatatacgtgggacacgacaagacgaaggacaaatacgtctgactgctacgccatcttggatttctGCCAATAACAGTGTCCctaaactttttggagttagagctacaggatgaaaatttctgtttgaaaaatctagcctttgctttcctgactgactgtgtgtgttggttcctgacttccctgaacagttgcatttcgcggggactattcgatgctattgcagtccgccaaggatgtttttgtgctggtcaagggcagtcaggtctgggatGAACGACGGGCTCTATGTGTTCTtaggtctacattttttgaaaggggaatgcttatttaagttggtgaggaaattacttttaaatgaagaccaggcatcctcgactgacgggatgaggtcgtgatgaggggtggtcgtttgaccgcggtcccatagcggatgcaggcaatgaggcagtgatcgctgagatcctgattgaaaactgcagaggtgtatttggagggcaagttggtcaggataatatctataaGGGTGCCCacgtttacagatttagggttgtacctggagGGTTCCTTggtgatttgtgtgagattgggggcatctagcttagattttaggattgtaggactgccggggtgttaagcatattccagtttaggtcacctaacagaacaaactctgaagatagatgaggggcaatcaattcacatagtgtccag
>TU394
tcctaagccaggtttcagacacagctagggcatccggattggtggagtgtgctagggcagtgaataaaacaaacttagggaggaggcttctaatgttaacatgcatgaaaccaaggcttttacggttgcagaagtcaacaaatgagaggggggatgggagtggaggtagacactgcagggcttggttaacctctacatcaccagagggacagaggaggagtaggataagggtacggctaaaggctaacaaAACTGGACGcctagtacgttcagaacagagagtaaaaggagcagatttctgggcacggtagaatagattcaaggcataatgtacagacaaaggtatagtaggatgtgaatacagtgggggtaaacctgtgcataGAGTGATAATggaagagatattgtctctagaaatagcatttaaaccaggtgatttCACcgcgtgtgtggggggtggaaatAAATTGTTAGCCGAGGCGTGATGAGCagtgctagaggctctacagtgaaataaaacaatagttaCAAACCAGAACAGCAATCGACACGGCATGGTGACGTTAGGGAAAGGCATGCGTAGCCATGTGATCATACAAGTCCAttgtgtggcTTCAGGCAGCTAGCGGCATGGGGCTAGCAGGCTAACAGAAAGTCTTTAGAGGGATGACGCGACGGAGGGAAGTCTGTTGTGGCCCCCTCGTGCAGTTACATCAGGGgacggatcagcagggctccgtgtggtaaaccaggccaattggcaaaatatgtaTAGTGGCCGAAGAAATATTTCCGAAGGGCCTCTCTCTctgctagcaggccgcagattagCGGCTGTGCATTCAAGGGTCGTTAGCTGCTATAATTCCAggtggaaaaaataaataaaaataatcataataaaaaatgtcataaaaaaaaaaaaatataggtTCAGAGCTTATGGTAAGAATAAGTCCGACtagctctggtttgagtcacgcTGTACAGACTAGCGAGAGTTGTCCGGGATAaaggtagctgatgaccgctagcaaagGATAGCTGACTGCTAGCTAGTGGCTTCGGTATGTATTCGATGGGCCTCGTAAGCCAACAGTCCGttgtgctctagacagctagcattCAGGGGATGTTAGCTGCGAAGTTCGGAAGGTGataaggttcagagcttgcgataggaatccggggatatggagagaaaaataggtccgtaTGCTCTGGTTGAAACGTGTTGtacaaactggcgagagctttccgagctagaGGTTAGCTGATGAtcgttagctggctagttagctggctagtttatgTTGGAGAGATTCCAGTAAGAGGCAAAGAAAAATACGTTAGAGAAAAAGCAGGTCCACACCACATTggatgaggcgggttgcaggagagtattttgaagtaagggtttagaaaaatataaaaagatatgcaaagaaaaatatacagtataaaaatgtatatatatacgtgggacacgacaagacgaaggacaaatacgtctgactgctacgccatcttggatttctGCCAATAACAGTGTCCctaaactttttggagttagagctacaggatgaaaatttctgtttgaaaaatctagcctttgctttcctgactgactgtgtgtgttggttcctgacttccctgaacagttgcatttcgcggggactattcgatgctattgcagtccgccaaggatgtttttgtgctggtcaagggcagtcaggtctgggatGAACGACGGGCTCTATGTGTTCTtaggtctacattttttgaaaggggaatgcttatttaagttggtgaggaaattacttttaaatgaagaccaggcatcctcgactgacgggatgaggtcgtgatgaggggtggtcgtttgaccgcggtcccatagcggatgcaggcaatgaggcagtgatcgctgagatcctgattgaaaactgcagaggtgtatttggagggcaagttggtcaggataatatctataaGGGTGCCCacgtttacagatttagggttgtacctggagGGTTCCTTggtgatttgtgtgagattgggggcatctagcttagattttaggattgtaggactgccggggtgttaagcatattccagtttaggtcacctaacagaacaaactctgaagatagatgaggggcaatcaattcacatagtgtccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU393 False 1831 lncRNA 0.44 2 334352 336258
TU394 True 2184 lncRNA 0.59 3 334352 337594

Neighbor

gene id symbol gene type direction distance location
tmem45a tmem45a coding downstream 28305 260364 ~ 306047 (-)
sft2d2a sft2b coding downstream 90733 237111 ~ 243619 (-)
LOC110523811 LOC106574160 coding downstream 136925 32649 ~ 197427 (-)
LOC118964585 NA coding upstream 165158 502752 ~ 504254 (-)
plcxd1 LOC106574112 coding upstream 295692 631974 ~ 681917 (-)
LOC110520928 jade3 coding upstream 364932 702526 ~ 736791 (-)
rp2 LOC106574114 coding upstream 411847 749441 ~ 771316 (-)
chst7 chst7 coding upstream 678148 1015742 ~ 1040056 (-)
G290 NA non-coding downstream 12592 317739 ~ 321760 (-)
G292 NA non-coding downstream 19645 311415 ~ 314707 (-)
G319 NA non-coding downstream 35857 298039 ~ 298495 (-)
G262 NA non-coding downstream 119121 213717 ~ 215231 (-)
G231 NA non-coding downstream 161155 172931 ~ 173197 (-)
G291 NA non-coding upstream 7363 344957 ~ 345409 (-)
G337 NA non-coding upstream 13198 350792 ~ 358648 (-)
G338 NA non-coding upstream 24557 362151 ~ 362360 (-)
G339 NA non-coding upstream 25399 362993 ~ 363212 (-)
G332 NA non-coding upstream 32522 370116 ~ 370571 (-)
G202 NA other downstream 308679 25269 ~ 25673 (-)
G1355 NA other upstream 632591 970185 ~ 976099 (-)
G1651 LOC106574119 other upstream 1415651 1753245 ~ 1760430 (-)
G1788 NA other upstream 1754816 2092410 ~ 2097715 (-)
G1954 NA other upstream 2196436 2534030 ~ 2534513 (-)

Expression


Co-expression Network