G183


Basic Information

Item Value
gene id G183
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 362704 ~ 363069 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU227
AACAAAACACCCATATTGAAAGAATTTGAACAATTAGACACCCTACAACCCACACCTACATCCACGTGTATAAATCTGATTGATGGATTGCGCAGTAAACAGGCTCAGGTGTATAACTTCggctccttccaccttcaaaTAATAGGCAAGaggaccaaccatggagaatagtaagacactATTAAAGAGAGTGATGAACACtctttaaaacctctttgggctagggggcagtattttcacgtccagatgaaaAGCACGCCCaaggtaaactgcctgctactcaggcccagaagctaggatatgcatattattagtagatttggatagaaaacactctgaagtttctaaaactgtttgaataatgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU227 True 366 lncRNA 0.47 1 362704 363069

Neighbor

gene id symbol gene type direction distance location
LOC110532027 tomm70 coding downstream 21138 384207 ~ 421233 (+)
tbc1d23 tbc1d23 coding downstream 76896 439965 ~ 497128 (+)
nit2 nit2 coding downstream 239034 602103 ~ 617595 (+)
slc9a7 slc9a7 coding downstream 418771 781840 ~ 1244153 (+)
tubgcp5 tubgcp5 coding downstream 726327 1089396 ~ 1133908 (+)
G166 NA non-coding upstream 42730 318047 ~ 319974 (+)
G160 NA non-coding upstream 54941 307551 ~ 307763 (+)
G72 NA non-coding upstream 196824 165619 ~ 165880 (+)
G66 NA non-coding upstream 203944 151865 ~ 158760 (+)
G25 NA non-coding upstream 284404 55784 ~ 78300 (+)
G184 NA non-coding downstream 1674 364743 ~ 365179 (+)
G345 NA non-coding downstream 12110 375179 ~ 375493 (+)
G355 NA non-coding downstream 26504 389573 ~ 391342 (+)
G357 NA non-coding downstream 30356 393425 ~ 395232 (+)
G369 NA non-coding downstream 60147 423216 ~ 423512 (+)
G51 NA other upstream 232441 120466 ~ 130263 (+)
G50 NA other upstream 242397 112959 ~ 120307 (+)
G26 NA other upstream 268986 56555 ~ 93718 (+)
G19 NA other upstream 290405 52711 ~ 72299 (+)
G583 NA other downstream 640714 1003783 ~ 1010207 (+)
G961 NA other downstream 1715829 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 1895814 2258883 ~ 2305334 (+)
G2016 NA other downstream 2281266 2644335 ~ 2645169 (+)
G2343 NA other downstream 2851628 3214697 ~ 3216234 (+)

Expression


Co-expression Network