G370


Basic Information

Item Value
gene id G370
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 423535 ~ 423768 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU447
ctcgcacctggctcctgttatctaacaaaagaccgcTTGTTCTGCAACCCCACGCTCTGAATGTGCCCTgtcttctgtatttttccatcaggAGAAAGTCCCATGGCCTTGAAACggttaacaatgtttcaagtcagctatgttgcataacacatacatacatccacacaagccaacagcagataatattcaatcatatatatggtaatggctataatgtaaaacaCAGAAACC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU447 True 234 lncRNA 0.48 1 423535 423768

Neighbor

gene id symbol gene type direction distance location
LOC110532027 tomm70 coding upstream 2302 384207 ~ 421233 (+)
tbc1d23 tbc1d23 coding downstream 16197 439965 ~ 497128 (+)
nit2 nit2 coding downstream 178335 602103 ~ 617595 (+)
slc9a7 slc9a7 coding downstream 358072 781840 ~ 1244153 (+)
tubgcp5 tubgcp5 coding downstream 665628 1089396 ~ 1133908 (+)
cyfip1 LOC106590724 coding downstream 749943 1173711 ~ 1300624 (+)
G369 NA non-coding upstream 23 423216 ~ 423512 (+)
G357 NA non-coding upstream 28303 393425 ~ 395232 (+)
G355 NA non-coding upstream 32193 389573 ~ 391342 (+)
G345 NA non-coding upstream 48042 375179 ~ 375493 (+)
G184 NA non-coding upstream 58356 364743 ~ 365179 (+)
G373 NA non-coding downstream 7893 431661 ~ 432635 (+)
G376 NA non-coding downstream 11745 435513 ~ 435795 (+)
G396 NA non-coding downstream 39734 463502 ~ 464018 (+)
G391 NA non-coding downstream 41119 464887 ~ 466528 (+)
G399 NA non-coding downstream 50455 474223 ~ 474581 (+)
G166 NA other upstream 103561 318047 ~ 319974 (+)
G51 NA other upstream 293272 120466 ~ 130263 (+)
G50 NA other upstream 303228 112959 ~ 120307 (+)
G26 NA other upstream 329817 56555 ~ 93718 (+)
G19 NA other upstream 351236 52711 ~ 72299 (+)
G583 NA other downstream 580015 1003783 ~ 1010207 (+)
G961 NA other downstream 1655130 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 1835115 2258883 ~ 2305334 (+)
G2016 NA other downstream 2220567 2644335 ~ 2645169 (+)
G2343 NA other downstream 2790929 3214697 ~ 3216234 (+)

Expression


Co-expression Network