G399


Basic Information

Item Value
gene id G399
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 474223 ~ 474581 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU480
ggggggagaggattgAACTGCCCCACAATCCAAAGTACTAAGGTTGATATAGTATACTATTAAAGTATTCAcacatcaaattttatttgtcacatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaatagATGtcgtagacctcacagtgaaatgcttaatacaacaggtgtggtagaccttacagtgaaatgctgaatacaatagatgtagtagaccttacagtgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU480 True 321 lncRNA 0.43 2 474223 474581

Neighbor

gene id symbol gene type direction distance location
LOC110532027 tomm70 coding upstream 52990 384207 ~ 421233 (+)
nit2 nit2 coding downstream 127522 602103 ~ 617595 (+)
slc9a7 slc9a7 coding downstream 307259 781840 ~ 1244153 (+)
tubgcp5 tubgcp5 coding downstream 614815 1089396 ~ 1133908 (+)
cyfip1 LOC106590724 coding downstream 699130 1173711 ~ 1300624 (+)
LOC118964682 NA coding downstream 852741 1327322 ~ 1328266 (+)
G391 NA non-coding upstream 7695 464887 ~ 466528 (+)
G396 NA non-coding upstream 10205 463502 ~ 464018 (+)
G376 NA non-coding upstream 38428 435513 ~ 435795 (+)
G373 NA non-coding upstream 41588 431661 ~ 432635 (+)
G370 NA non-coding upstream 50455 423535 ~ 423768 (+)
G420 NA non-coding downstream 82806 557387 ~ 557594 (+)
G447 NA non-coding downstream 138073 612654 ~ 616251 (+)
G456 LOC106574112 non-coding downstream 157385 631966 ~ 633986 (+)
G464 NA non-coding downstream 175157 649738 ~ 655342 (+)
G465 NA non-coding downstream 176498 651079 ~ 653450 (+)
G166 NA other upstream 154249 318047 ~ 319974 (+)
G51 NA other upstream 343960 120466 ~ 130263 (+)
G50 NA other upstream 353916 112959 ~ 120307 (+)
G26 NA other upstream 380505 56555 ~ 93718 (+)
G19 NA other upstream 401924 52711 ~ 72299 (+)
G583 NA other downstream 529202 1003783 ~ 1010207 (+)
G961 NA other downstream 1604317 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 1784302 2258883 ~ 2305334 (+)
G2016 NA other downstream 2169754 2644335 ~ 2645169 (+)
G2343 NA other downstream 2740116 3214697 ~ 3216234 (+)

Expression


Co-expression Network