G389


Basic Information

Item Value
gene id G389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 661536 ~ 662909 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU468
gtatattgatgtgtatagagtatattgatgtgtatagagtatattgatgtgtatagtttAATTcatgtatattgatgtatatagTGCACATTGATGTATATAAATGTGAATAGTGTATATTGACGTGTAtaatgtatattgatgtgtatagagtatATTGATGTATATAAATGTGAATAGTGTATATTGACGTGTAtaatgtatattgatgtgtatagtgtatattgatgtttatagtgaactgtgtattgatgtgtatattgctAAAATAGTGTATATTGGTGTATttagctcagtgtgtcaaatcgaagggcctgttgtccggacctctggcagcctCTTTGGGGGTgcctcagggttcaattctcgggattACTCTTTTccctgtatatatcaatgatgttgctcttgctgctggtgattctctgatccacctctacgcagacgacaccattctgtttacatctagcccttctttggacactgtgttaactaacctccagacgagcttcaatgccatacaacactccttccgtggcctccaactgctctttatTGCAaggaaaactaaatgcatgatattcaaccgatcgctgccagcacctgcccgcccgtccagcatcactactctggacggttctgacttagaatatgtggacaactacaaatacctaggtgtctggttagactgtaaactctccttccaaactcacattaagcatctacaatccaaaatgaaatctagaatctgcttcctatttcacaacaaagcctccttcaacataccctcgtaaaactgaccatcctaccggtcctcgacttcagcgaagtcatttacaaaatagcctccaacactctactcagcaaactggatcacagtgccatctgttttgtcaccaaagccccattatactacccaccactgcgacctgtacgctctcgttggctggccctcgcttcattctcgtcgccaaacccactggctccaggtcatccacaagtctctgctaggtaaagccccaccttatctcagctcactggtcaccatagcagtaaCCACCTGTAGcgctcgctccagcaggtatatctcactggtctcccccaaagccaattcttcctttggccgtctctccttccagttctctgctgccacgaACTGcaaaatgactggaacgaactgcaaaaatctctgaagctggagactcttacctccctcactaactttaagcatcagctgtcagagcagctcacagatcactgcacctgtacatagctcatctgtaaatagcccatccaatctacctcatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU468 True 1308 lncRNA 0.52 2 661536 662909

Neighbor

gene id symbol gene type direction distance location
nit2 nit2 coding upstream 43941 602103 ~ 617595 (+)
tbc1d23 tbc1d23 coding upstream 164408 439965 ~ 497128 (+)
LOC110532027 tomm70 coding upstream 240303 384207 ~ 421233 (+)
slc9a7 slc9a7 coding downstream 118931 781840 ~ 1244153 (+)
tubgcp5 tubgcp5 coding downstream 426487 1089396 ~ 1133908 (+)
cyfip1 LOC106590724 coding downstream 510802 1173711 ~ 1300624 (+)
LOC118964682 NA coding downstream 664413 1327322 ~ 1328266 (+)
gabrb3 LOC107673538 coding downstream 671188 1334097 ~ 1398380 (+)
G464 NA non-coding upstream 6194 649738 ~ 655342 (+)
G465 NA non-coding upstream 8086 651079 ~ 653450 (+)
G456 LOC106574112 non-coding upstream 27550 631966 ~ 633986 (+)
G447 NA non-coding upstream 45285 612654 ~ 616251 (+)
G420 NA non-coding upstream 103942 557387 ~ 557594 (+)
G467 NA non-coding downstream 3266 666175 ~ 671266 (+)
G476 NA non-coding downstream 35522 698431 ~ 698631 (+)
G477 NA non-coding downstream 36039 698948 ~ 784116 (+)
G485 NA non-coding downstream 64664 727573 ~ 727883 (+)
G486 NA non-coding downstream 65412 728321 ~ 729099 (+)
G166 NA other upstream 341562 318047 ~ 319974 (+)
G51 NA other upstream 531273 120466 ~ 130263 (+)
G50 NA other upstream 541229 112959 ~ 120307 (+)
G26 NA other upstream 567818 56555 ~ 93718 (+)
G19 NA other upstream 589237 52711 ~ 72299 (+)
G583 NA other downstream 340874 1003783 ~ 1010207 (+)
G961 NA other downstream 1415989 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 1595974 2258883 ~ 2305334 (+)
G2016 NA other downstream 1981426 2644335 ~ 2645169 (+)
G2343 NA other downstream 2551788 3214697 ~ 3216234 (+)

Expression


Co-expression Network