Gene
RNA
| Item | Value |
|---|---|
| gene id | G1253 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 688765 ~ 688992 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1564 | True | 228 | lncRNA | 0.39 | 1 | 688765 | 688992 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| plcxd1 | LOC106574112 | coding | downstream | 6848 | 631974 ~ 681917 (-) |
| LOC118964585 | NA | coding | downstream | 184511 | 502752 ~ 504254 (-) |
| tmem45a | tmem45a | coding | downstream | 382718 | 260364 ~ 306047 (-) |
| sft2d2a | sft2b | coding | downstream | 445146 | 237111 ~ 243619 (-) |
| LOC110523811 | LOC106574160 | coding | downstream | 491338 | 32649 ~ 197427 (-) |
| LOC110520928 | jade3 | coding | upstream | 13534 | 702526 ~ 736791 (-) |
| rp2 | LOC106574114 | coding | upstream | 60449 | 749441 ~ 771316 (-) |
| chst7 | chst7 | coding | upstream | 326750 | 1015742 ~ 1040056 (-) |
| nipa2 | nipa2 | coding | upstream | 611577 | 1300569 ~ 1311792 (-) |
| nipa1 | nipa1 | coding | upstream | 624514 | 1313506 ~ 1317525 (-) |
| G1216 | NA | non-coding | downstream | 77939 | 607905 ~ 610826 (-) |
| G1194 | NA | non-coding | downstream | 131191 | 557341 ~ 557574 (-) |
| G1162 | NA | non-coding | downstream | 187968 | 495190 ~ 500797 (-) |
| G1163 | NA | non-coding | downstream | 200808 | 484509 ~ 487957 (-) |
| G1258 | NA | non-coding | upstream | 9431 | 698423 ~ 698653 (-) |
| G1265 | NA | non-coding | upstream | 38491 | 727483 ~ 728304 (-) |
| G1294 | NA | non-coding | upstream | 111938 | 800930 ~ 808066 (-) |
| G1314 | NA | non-coding | upstream | 155378 | 844370 ~ 844736 (-) |
| G1320 | NA | non-coding | upstream | 167689 | 856681 ~ 857091 (-) |
| G202 | NA | other | downstream | 663092 | 25269 ~ 25673 (-) |
| G1355 | NA | other | upstream | 281193 | 970185 ~ 976099 (-) |
| G1651 | LOC106574119 | other | upstream | 1064253 | 1753245 ~ 1760430 (-) |
| G1788 | NA | other | upstream | 1403418 | 2092410 ~ 2097715 (-) |
| G1954 | NA | other | upstream | 1845038 | 2534030 ~ 2534513 (-) |
| G2192 | NA | other | upstream | 2053895 | 2742887 ~ 2743574 (-) |
