G476



Basic Information


Item Value
gene id G476
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 698431 ~ 698631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU564
gcgacttgtatgctctagtcggctggccctcgctacatattcgtcgccagacccactggctccaggtcatctacaagtccatgctaggtaaagctccgccttatctcagttcactggttacgatggcaacacctatccgtagcacgcgctccagcaggtgtatctcactgatcatccctaaagccaacacctcatttggcc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU564 True 201 lncRNA 0.43 1 698431 698631

Neighbor


gene id symbol gene type direction distance location
nit2 nit2 coding upstream 80836 602103 ~ 617595 (+)
tbc1d23 tbc1d23 coding upstream 201303 439965 ~ 497128 (+)
LOC110532027 tomm70 coding upstream 277198 384207 ~ 421233 (+)
slc9a7 slc9a7 coding downstream 83209 781840 ~ 1244153 (+)
tubgcp5 tubgcp5 coding downstream 390765 1089396 ~ 1133908 (+)
cyfip1 LOC106590724 coding downstream 475080 1173711 ~ 1300624 (+)
LOC118964682 NA coding downstream 628691 1327322 ~ 1328266 (+)
gabrb3 LOC107673538 coding downstream 635466 1334097 ~ 1398380 (+)
G467 NA non-coding upstream 27165 666175 ~ 671266 (+)
G389 NA non-coding upstream 35522 661536 ~ 662909 (+)
G464 NA non-coding upstream 43089 649738 ~ 655342 (+)
G465 NA non-coding upstream 44981 651079 ~ 653450 (+)
G456 LOC106574112 non-coding upstream 64445 631966 ~ 633986 (+)
G477 NA non-coding downstream 317 698948 ~ 784116 (+)
G485 NA non-coding downstream 28942 727573 ~ 727883 (+)
G486 NA non-coding downstream 29690 728321 ~ 729099 (+)
G500 NA non-coding downstream 50433 749064 ~ 756426 (+)
G514 NA non-coding downstream 78696 777327 ~ 779986 (+)
G166 NA other upstream 378457 318047 ~ 319974 (+)
G51 NA other upstream 568168 120466 ~ 130263 (+)
G50 NA other upstream 578124 112959 ~ 120307 (+)
G26 NA other upstream 604713 56555 ~ 93718 (+)
G19 NA other upstream 626132 52711 ~ 72299 (+)
G583 NA other downstream 305152 1003783 ~ 1010207 (+)
G961 NA other downstream 1380267 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 1560252 2258883 ~ 2305334 (+)
G2016 NA other downstream 1945704 2644335 ~ 2645169 (+)
G2343 NA other downstream 2516066 3214697 ~ 3216234 (+)

Expression



Co-expression Network