G477


Basic Information

Item Value
gene id G477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 698948 ~ 784116 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU565
ttttgcacacaatgtatatatagactccccttttttctactgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgttcacactgctatgccttatcttggccaggtcacagttgcaaatgagaacttgttctcaactagcctacctggttaaataaaggtgttctcaactagcctacctggttaaataaaggtgttctcaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU565 True 219 lncRNA 0.36 2 698948 784116

Neighbor

gene id symbol gene type direction distance location
nit2 nit2 coding upstream 81353 602103 ~ 617595 (+)
tbc1d23 tbc1d23 coding upstream 201820 439965 ~ 497128 (+)
LOC110532027 tomm70 coding upstream 277715 384207 ~ 421233 (+)
tubgcp5 tubgcp5 coding downstream 305280 1089396 ~ 1133908 (+)
cyfip1 LOC106590724 coding downstream 389595 1173711 ~ 1300624 (+)
LOC118964682 NA coding downstream 543206 1327322 ~ 1328266 (+)
gabrb3 LOC107673538 coding downstream 549981 1334097 ~ 1398380 (+)
atp10a atp10a coding downstream 675951 1460067 ~ 1596619 (+)
G476 NA non-coding upstream 317 698431 ~ 698631 (+)
G467 NA non-coding upstream 27682 666175 ~ 671266 (+)
G389 NA non-coding upstream 36039 661536 ~ 662909 (+)
G464 NA non-coding upstream 43606 649738 ~ 655342 (+)
G465 NA non-coding upstream 45498 651079 ~ 653450 (+)
G535 NA non-coding downstream 53865 837981 ~ 839050 (+)
G541 NA non-coding downstream 74269 858385 ~ 858631 (+)
G542 NA non-coding downstream 75644 859760 ~ 860156 (+)
G544 NA non-coding downstream 93115 877231 ~ 884260 (+)
G546 NA non-coding downstream 100372 884488 ~ 887639 (+)
G166 NA other upstream 378974 318047 ~ 319974 (+)
G51 NA other upstream 568685 120466 ~ 130263 (+)
G50 NA other upstream 578641 112959 ~ 120307 (+)
G26 NA other upstream 605230 56555 ~ 93718 (+)
G19 NA other upstream 626649 52711 ~ 72299 (+)
G583 NA other downstream 219667 1003783 ~ 1010207 (+)
G961 NA other downstream 1294782 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 1474767 2258883 ~ 2305334 (+)
G2016 NA other downstream 1860219 2644335 ~ 2645169 (+)
G2343 NA other downstream 2430581 3214697 ~ 3216234 (+)

Expression


Co-expression Network