G514


Basic Information

Item Value
gene id G514
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 777327 ~ 779986 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU625
ctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaacAATGTTTactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttgttctagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatcaacaatgttttactagtcatctagtcatcaaccatgttttgctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttgctagtcatctagtcatcaaccatgctttactagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgtttgGCTAGTCATCcagtcatcaaccatgttttactagtcatcaaccatgttgttctagtcatctagtcatcaaccatgtttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttgttagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgatttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttactagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttgctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttgctagtcatctagtcatcaaccatgttttactagtcatctagtcatcaaccatgttttaccAGTCATCTATTCATCAGCCATGTTTTGCTAGTCATCTAGTCATTACCATGTTTtgctagtcatctagtcatcaaccTTGCGCAGTACCACGGAGTAGAGATGGTGGGTGCAGCTTTGATTTTTGGACCAATGGCAGAAGAGGAAGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU625 True 2207 lncRNA 0.38 4 777327 779986

Neighbor

gene id symbol gene type direction distance location
nit2 nit2 coding upstream 159732 602103 ~ 617595 (+)
tbc1d23 tbc1d23 coding upstream 280199 439965 ~ 497128 (+)
LOC110532027 tomm70 coding upstream 356094 384207 ~ 421233 (+)
slc9a7 slc9a7 coding downstream 1854 781840 ~ 1244153 (+)
tubgcp5 tubgcp5 coding downstream 309410 1089396 ~ 1133908 (+)
cyfip1 LOC106590724 coding downstream 393725 1173711 ~ 1300624 (+)
LOC118964682 NA coding downstream 547336 1327322 ~ 1328266 (+)
gabrb3 LOC107673538 coding downstream 554111 1334097 ~ 1398380 (+)
G500 NA non-coding upstream 20901 749064 ~ 756426 (+)
G486 NA non-coding upstream 48228 728321 ~ 729099 (+)
G485 NA non-coding upstream 49444 727573 ~ 727883 (+)
G476 NA non-coding upstream 78696 698431 ~ 698631 (+)
G467 NA non-coding upstream 106061 666175 ~ 671266 (+)
G535 NA non-coding downstream 57995 837981 ~ 839050 (+)
G541 NA non-coding downstream 78399 858385 ~ 858631 (+)
G542 NA non-coding downstream 79774 859760 ~ 860156 (+)
G544 NA non-coding downstream 97245 877231 ~ 884260 (+)
G546 NA non-coding downstream 104502 884488 ~ 887639 (+)
G166 NA other upstream 457353 318047 ~ 319974 (+)
G51 NA other upstream 647064 120466 ~ 130263 (+)
G50 NA other upstream 657020 112959 ~ 120307 (+)
G26 NA other upstream 683609 56555 ~ 93718 (+)
G19 NA other upstream 705028 52711 ~ 72299 (+)
G583 NA other downstream 223797 1003783 ~ 1010207 (+)
G961 NA other downstream 1298912 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 1478897 2258883 ~ 2305334 (+)
G2016 NA other downstream 1864349 2644335 ~ 2645169 (+)
G2343 NA other downstream 2434711 3214697 ~ 3216234 (+)

Expression


Co-expression Network