XLOC_019848 (hspa4a)


Basic Information

Item Value
gene id XLOC_019848
gene name hspa4a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 43137500 ~ 43171249 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039056
GGCTTAACACATTACATGTAGCACAAACCGGTGTACAGCAACTTAGTCAATGGACATTCGAGAGCCAAGAAGAGTTTCATAAATAACAACCTCAACAACACTCCTCTGCgactgttatatttattttaaaggcttCTTGTTTCTAGCGCTGAGAGTTTTATCCGGGCTGTGATCAGCAGTGAAGATGTCAGTGGTGGGGTTTGATGTGGGTTTCCAGAGCTGTTATGTTGCTGTGGCTCGGGCCGGTGGGATTGAAACCGTAGCAAACGAATACAGCGACAGATGTACACCGTCATTTGTATCATTCGGTCCTCGTAATCGGTCGATCGGGGCAGCTGCTAAAAGCCAGGTGGTCACAAACTGCAAGAACACTGTTCAGGGTTTTAAGCGATTCCATGGCAGGGCGTTCAGCGACCCGTATGTGGAAACCACACAGTCCAGTCTGGTCTATGATCTTGCACAGATGCCTAATGGAACCACCGGCATTAAGGTCATGTATATGGAGGAAGAGAAGCTGTTTGGCATCGAGCAGGTCACTGCAATGCTGCTGACCAAACTGAAGGAGACCGCAGAATCTGCACTCAAAAAGCCTGTGGCGGACTGTGTCATCTCTGTTCCCAGCTATTTTACAGATGCCGAGAGAAGATCAGTGATGGATGCTGCACAGATCGCAGGCCTCAACTGTCTCAGACTCATGAATGACACTACAGCAGTTGCACTGGCGTATGGCATCTACAAACAGGACCTGCCTGCTCCAGAGGAAAAGCCCAGGACTGTTGTGTTTGTGGATGTTGGCCATGCTGGTTACCAGGTCTCTGCATGTGCCTTCAACAAAGGCAAGTTAAAGGTTCTGGGCTCTGCGTTTGACCCTGAGCTGGGCGGAAAGGACTTTGACGAGGTGCTAGTGAAGCATTTCTGTGAGGAATTTGCCCAGAAGTACAAGCTGGATGTGCGATCGAAGCCCCGCGCTCTGGTTCGCCTTTATCAGGAGTGCGAGAAGCTGAAAAAACTGATGAGCGCAAACTCCTCAGACCTGCCACTCAACATCGAGTGCTTCATGAACGACATCGATGTCAGCAGCAAACTCAACAGAGCCAAGTTTGAGGAGCTTTGTGCGGGGCTGCTGGCCAAGGTGGAGGCTCCCTTGCAAAGCATCATGGAACAAACCAGGCTGAAGAAAGAGGACATCTATGCAGTGGAGATCATCGGCGGCGCCTCCAGGATTCCAGCCATTAAAGAGCGAATCAGCAAGTTTTTTGGAAAGGAGTTGAGCACCACGTTGAATCTGGATGAAGCTGTGGCCAGAGGATGTGCACTGCAGTGTGCAATCCTGTCGCCTGCTTTTAAAGTGCGCGAGTTCTCCATCACAGACGTGGTGCCTTACCCAATCTCTCTGAAGTGGACTTCAGCAGCAGATGAAGGCGTCAGTGATTGTGAAGTTTTCCCAAAGAATCACGCCGCACCCTTCTCGAAAGTGTTAACTTTCTACCGGAAGGAACCCTTCACCTTGGAGGCCTACTACAACAATCCTAAAGCCCTGCCCTATCCCGATCCTACCATAGGTCAGTTTACCATCCATAAGGTGGTTCCTCAGGCATCAGGAGAGAGCTCCAAAGTGAAAGTGAAGGTCCGAGTAAATGTTCACGGGGTCTTCAGTGTTTCCAGCGCCTCATTGGTGGAACTGCTGAAACCCGGCGAGGGAGAAGAGCCAATGGAGACGGACACCCCTGCCAAAGACGAAGAGAACAAGATGCAAGTGGATCAAGAGGCGCAGAAGGCTCAAGCTGATGATCAGAAAGAACAAGCTGACAAGAAATCAGACACTGAAGACATGGAGACTTCACCAGAAGACAAACAGGAGAAGAAGAATGATCAGCCTCCACAGGCCAAGAAAGCCAAAGTGAAAACCAAGACGGTGGATCTGCCCATCATGAACAGCCTGCAGTGGCAGCTCGCCAGCGACGCGCTCAATCTCTTCATGGAGAACGAGGGGAAGATGATCATGCAGGATAAACTGGAGAAAGAAAGGAACGATGCGAAGAACTACGTGGAGGAATACGTTTATGAAATGAGAGATAAACTGCATGGAGTGCTGGAGAACTTTGTCAGCGAGGCGGAGCGCGATTCTTTCTCCCTTAAACTGGAGGACACTGAAAACTGGTTGTATGAAGAAGGAGAGGACCAACAGAAACAAGTGTACATTGACAAACTGGCAGAGTTAAAGAAACTGGGTGATCCTATTCAGAGCCGATACATTGAGGCGGAGGTGCGACCTAAAGCTTTCGAGGAGCTCGGAAGACAAATCCAGCTGTACATGAAAGTTGTAGAGGCTTTTAAAGCAAAGGATGAGCTGTATGATCATCTGGATGAGCTGGAGATGGTGAAGGTGGAGAAGCAGGTGAATGATGCCATGACCTGGATGAACAACAAAATGAACCTGCAGAGCAAACAGAGTCTCAGCCAGGACCCCGCCGTTAAAGTGCAAGAGATCCAGACCAAAACAAAGGAGCTGTACTCCGCTTGCAATCCCGTTGTCACCAAATCCAAACCTAAAGTAGAGCCTCCAAAAGAGGAGACGGCAGCCGAACAGAACGGCCCCGTGAACGGACAGCAGCCTTCAGACGCTCAGCCAGAGAAATCTCCAGAAAACACAGAGGCCAAACTTCCCGAAATGGACATTGACTAAATCTGCTCGACCTCTTCTGTGTGCGTCCAGCCTCTCTCACGCctcagaaacaaacaaatgtacacTGATTTTGTTGAAGCCGGCTTCGAAACTCAGCCAATGCTCTCTTGCTTTCGATGCCGtttatcttgtttttgtttgtttgtttgcggTTTAAAACAGGAGACCAGGATCCTTTTTTTTAGTTCTTCATCAATTAAAAAGCAGAACAGGATGAGAACCCGACCTCCTCATTTTGGAGATGCTTAGCATTGAAGATTTAAAGCACTTAGACTATCTACACAAGTGAAATACTTGGCGATAAAAGCACGGAAATGCTGGAGAAGCGGATGTTGAGCTGACAGAAGAGCGTTTGAGGCATGTATGCGCTGTATGTTGATGTAGATCTGCAGTGTTTGATCGTGAGCGGTGCGtttgcctgtttgtttgtttttcttttccttttctacCTGTAACAAGTGGAGACCAATTGGGTGTTCACTCCAGTcgcaaatataataataataagaatgatAATAAACCATTTTTGGTAT
>TCONS_00039057
GGCTTAACACATTACATGTAGCACAAACCGGTGTACAGCAACTTAGTCAATGGACATTCGAGAGCCAAGAAGAGTTTCATAAATAACAACCTCAACAACACTCCTCTGCgactgttatatttattttaaaggcttCTTGTTTCTAGCGCTGAGAGTTTTATCCGGGCTGTGATCAGCAGTGAAGATGTCAGTGGTGGGGTTTGATGTGGGTTTCCAGAGCTGTTATGTTGCTGTGGCTCGGGCCGGTGGGATTGAAACCGTAGCAAACGAATACAGCGACAGATGTACACCGTCATTTGTATCATTCGGTCCTCGTAATCGGTCGATCGGGGCAGCTGCTAAAAGCCAGGTGGTCACAAACTGCAAGAACACTGTTCAGGGTTTTAAGCGATTCCATGGCAGGGCGTTCAGCGACCCGTATGTGGAAACCACACAGTCCAGTCTGGTCTATGATCTTGCACAGATGCCTAATGGAACCACCGGCATTAAGGTCATGTATATGGAGGAAGAGAAGCTGTTTGGCATCGAGCAGGTCACTGCAATGCTGCTGACCAAACTGAAGGAGACCGCAGAATCTGCACTCAAAAAGCCTGTGGCGGACTGTGTCATCTCTGTTCCCAGCTATTTTACAGATGCCGAGAGAAGATCAGTGATGGATGCTGCACAGATCGCAGGCCTCAACTGTCTCAGACTCATGAATGACACTACAGCAGTTGCACTGGCGTATGGCATCTACAAACAGGACCTGCCTGCTCCAGAGGAAAAGCCCAGGACTGTTGTGTTTGTGGATGTTGGCCATGCTGGTTACCAGGTCTCTGCATGTGCCTTCAACAAAGGCAAGTTAAAGGTTCTGGGCTCTGCGTTTGACCCTGAGCTGGGCGGAAAGGACTTTGACGAGGTGCTAGTGAAGCATTTCTGTGAGGAATTTGCCCAGAAGTACAAGCTGGATGTGCGATCGAAGCCCCGCGCTCTGGTTCGCCTTTATCAGGAGTGCGAGAAGCTGAAAAAACTGATGAGCGCAAACTCCTCAGACCTGCCACTCAACATCGAGTGCTTCATGAACGACATCGATGTCAGCAGCAAACTCAACAGAGCCAAGTTTGAGGAGCTTTGTGCGGGGCTGCTGGCCAAGGTGGAGGCTCCCTTGCAAAGCATCATGGAACAAACCAGGCTGAAGAAAGAGGACATCTATGCAGTGGAGATCATCGGCGGCGCCTCCAGGATTCCAGCCATTAAAGAGCGAATCAGCAAGTTTTTTGGAAAGGAGTTGAGCACCACGTTGAATCTGGATGAAGCTGTGGCCAGAGGATGTGCACTGCAGTGTGCAATCCTGTCGCCTGCTTTTAAAGTGCGCGAGTTCTCCATCACAGACGTGGTGCCTTACCCAATCTCTCTGAAGTGGACTTCAGCAGCAGATGAAGGCGTCAGTGATTGTGAAGTTTTCCCAAAGAATCACGCCGCACCCTTCTCGAAAGTGTTAACTTTCTACCGGAAGGAACCCTTCACCTTGGAGGCCTACTACAACAATCCTAAAGCCCTGCCCTATCCCGATCCTACCATAGGTCAGTTTACCATCCATAAGGTGGTTCCTCAGGCATCAGGAGAGAGCTCCAAAGTGAAAGTGAAGGTCCGAGTAAATGTTCACGGGGTCTTCAGTGTTTCCAGCGCCTCATTGGTGGAACTGCTGAAACCCGGCGAGGGAGAAGAGCCAATGGAGACGGACACCCCTGCCAAAGACGAAGAGAACAAGATGCAAGTGGATCAAGAGGCGCAGAAGGCTCAAGCTGATGATCAGAAAGAACAAGCTGACAAGAAATCAGACACTGAAGACATGGAG

Function

symbol description
hspa4a Predicted to enable ATP binding activity. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including gut; head; liver; pectoral fin bud; and somite. Human ortholog(s) of this gene implicated in Chagas disease. Orthologous to human HSPA4 (heat shock protein family A (Hsp70) member 4).

GO:

id name namespace
GO:0005829 cytosol cellular_component
GO:0005634 nucleus cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-2832 Predicted to enable ATP binding activity. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including gut; head; liver; pectoral fin bud; and somite. Human ortholog(s) of this gene implicated in Chagas disease. Orthologous to human HSPA4 (heat shock protein family A (Hsp70) member 4).

Ensembl:

ensembl_id ENSDARG00000004754

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039056 False 3219 mRNA 0.48 19 43137500 43171249
TCONS_00039057 True 1837 mRNA 0.50 13 43151024 43171249

Neighbor

gene id symbol gene type direction distance location
XLOC_019847 p4ha2 coding downstream 5748 43097798 ~ 43131752 (-)
XLOC_019846 si:ch73-68b22.2 coding downstream 43290 43080469 ~ 43094210 (-)
XLOC_019845 jakmip2 coding downstream 58339 43029708 ~ 43079161 (-)
XLOC_019844 dpysl3 coding downstream 115452 42970983 ~ 43022048 (-)
XLOC_019843 zmp:0000001268 coding downstream 260935 42870101 ~ 42876565 (-)
XLOC_019849 NA coding upstream 75458 43246707 ~ 43251824 (-)
XLOC_019850 NA coding upstream 154032 43325281 ~ 43325892 (-)
XLOC_019851 sowahaa coding upstream 155664 43326913 ~ 43328056 (-)
XLOC_019852 ccni2 coding upstream 208629 43379878 ~ 43398457 (-)
XLOC_019853 AL954767.1 coding upstream 219152 43390401 ~ 43393079 (-)
XLOC_019840 NA non-coding downstream 981248 42150360 ~ 42156252 (-)
XLOC_019838 NA non-coding downstream 1088695 42043974 ~ 42048805 (-)
XLOC_019831 NA non-coding downstream 1544337 41590870 ~ 41593163 (-)
XLOC_019828 CABZ01034722.1 non-coding downstream 1785835 41351545 ~ 41351665 (-)
XLOC_019825 CU570984.1 non-coding downstream 1885952 41251431 ~ 41251548 (-)
XLOC_019864 NA non-coding upstream 513613 43684862 ~ 43700280 (-)
XLOC_019872 NA non-coding upstream 985824 44157073 ~ 44157770 (-)

Expression


Co-expression Network