Gene
RNA
| Item | Value |
|---|---|
| gene id | G1320 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 856681 ~ 857091 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1641 | True | 411 | lncRNA | 0.39 | 1 | 856681 | 857091 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rp2 | LOC106574114 | coding | downstream | 85365 | 749441 ~ 771316 (-) |
| LOC110520928 | jade3 | coding | downstream | 119890 | 702526 ~ 736791 (-) |
| plcxd1 | LOC106574112 | coding | downstream | 174764 | 631974 ~ 681917 (-) |
| LOC118964585 | NA | coding | downstream | 352427 | 502752 ~ 504254 (-) |
| tmem45a | tmem45a | coding | downstream | 550634 | 260364 ~ 306047 (-) |
| chst7 | chst7 | coding | upstream | 158651 | 1015742 ~ 1040056 (-) |
| nipa2 | nipa2 | coding | upstream | 443478 | 1300569 ~ 1311792 (-) |
| nipa1 | nipa1 | coding | upstream | 456415 | 1313506 ~ 1317525 (-) |
| LOC100135976 | LOC100135976 | coding | upstream | 925236 | 1782327 ~ 1821060 (-) |
| si:ch211-201h21.5 | LOC106574205 | coding | upstream | 1112428 | 1969519 ~ 1973362 (-) |
| G1314 | NA | non-coding | downstream | 11945 | 844370 ~ 844736 (-) |
| G1294 | NA | non-coding | downstream | 48615 | 800930 ~ 808066 (-) |
| G1265 | NA | non-coding | downstream | 128377 | 727483 ~ 728304 (-) |
| G1258 | NA | non-coding | downstream | 158028 | 698423 ~ 698653 (-) |
| G1253 | NA | non-coding | downstream | 167689 | 688765 ~ 688992 (-) |
| G1321 | NA | non-coding | upstream | 18839 | 875930 ~ 876883 (-) |
| G1336 | NA | non-coding | upstream | 86932 | 944023 ~ 944952 (-) |
| G1337 | NA | non-coding | upstream | 88476 | 945567 ~ 945881 (-) |
| G1351 | NA | non-coding | upstream | 107971 | 965062 ~ 967554 (-) |
| G1355 | NA | non-coding | upstream | 113315 | 970185 ~ 976099 (-) |
| sft2d2a | sft2b | other | downstream | 613258 | 237111 ~ 243619 (-) |
| G202 | NA | other | downstream | 831008 | 25269 ~ 25673 (-) |
| G1651 | LOC106574119 | other | upstream | 896154 | 1753245 ~ 1760430 (-) |
| G1788 | NA | other | upstream | 1235319 | 2092410 ~ 2097715 (-) |
| G1954 | NA | other | upstream | 1676939 | 2534030 ~ 2534513 (-) |
| G2192 | NA | other | upstream | 1885796 | 2742887 ~ 2743574 (-) |
