G544


Basic Information

Item Value
gene id G544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 877231 ~ 884260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU656
gtctgctgtcggtaggggtaaggagtctgctgtcggtatggtacggttagggagtctgctgtcggtagggaagggttagggagtctgctgtcggtagaagtaggggtagggagtctgctgtcggtaggggtagggagtctgctgtcggtagggtaggggtagggagtctgctgtcggtaggggtaggggtagggagtctgcagtcggtagggttagggagtctgctgtcggtagggtaaggttagggagtctgctgtcggtagggtagggttagggagtctgctgtcggtagggtaagggtagggagtctgctgtcggtagggcaagggtagggagtctgctgtcggtagggcagggttagggagtctgctgtcggtagggcagggttagggagtctgctgtcggtagggcagggagtctgctgtcggtagggcagggttagggagtctgctgtcggtagggcagggttagggagtctgctgtcggtagggcagggttagggagtctgctgtcggtaggggtagggagtctgctgttggtagggtaggggtagggagtctgctgtcggtaggggtagggagtctgctgtcggtatggtaaggttagggagtctgctgtcggtagggtagggttagggagtctgctgtcggtagggtagggttagggagtctgctgtcggtagggtaggggtagggagtctgctgtcggtagggcagggttagggagtcgactgtcggtagggcagggttagggagtctgctgtcggtagggcagggttagggagtctgctgttggtagggtaggggtagggagtcttttgtcggtagggtaaggagtctcctgccggtagggtaggggtagggagtttgctgtcggtagggttagggagtttgctgtcggtagggttagggagtttgctgtcggtaggggtagggagtctgctgtcggtaggggtagggagtctgctgtcggtagggtaaggttagggagtctgctgtcgttagggcagggttagggagtctgctgtcggtagggcagggttagggagtctgctgtcggtagggcagggttagggagtctgctgtcggtagggcagggttagggagtctgctttcggtaggggtagggagtctgctgtttgtagggtaggggtagggagtcttttgtcggtagggtaaggagtctccttccggtagggtaggggtagggagtttgctgtcagtagggttagggagtttgctgtcggtagggttagggagtttgctgtcggtagggtaggggtagggagtctgctgtcggtaggggtagggagtctgctgtcggtagggtaaggttagggagtctgctgtcggtagggtaggggtagggagtctgctgtcggtagggtaggggtacggagtctgctgtcggtagggcaggggtagggagtctgctgtcggtagggcagggttagggaatCTGCTGTCGGTa

Function

NR:

description
PREDICTED: cell surface glycoprotein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU656 True 1470 lncRNA 0.44 2 877231 884260

Neighbor

gene id symbol gene type direction distance location
nit2 nit2 coding upstream 259636 602103 ~ 617595 (+)
tbc1d23 tbc1d23 coding upstream 380103 439965 ~ 497128 (+)
LOC110532027 tomm70 coding upstream 455998 384207 ~ 421233 (+)
tubgcp5 tubgcp5 coding downstream 205136 1089396 ~ 1133908 (+)
cyfip1 LOC106590724 coding downstream 289451 1173711 ~ 1300624 (+)
LOC118964682 NA coding downstream 443062 1327322 ~ 1328266 (+)
gabrb3 LOC107673538 coding downstream 449837 1334097 ~ 1398380 (+)
atp10a atp10a coding downstream 575807 1460067 ~ 1596619 (+)
G542 NA non-coding upstream 17075 859760 ~ 860156 (+)
G541 NA non-coding upstream 18600 858385 ~ 858631 (+)
G535 NA non-coding upstream 38181 837981 ~ 839050 (+)
G514 NA non-coding upstream 97245 777327 ~ 779986 (+)
G500 NA non-coding upstream 120805 749064 ~ 756426 (+)
G546 NA non-coding downstream 228 884488 ~ 887639 (+)
G545 NA non-coding downstream 3051 887311 ~ 940693 (+)
G551 NA non-coding downstream 57039 941299 ~ 941545 (+)
G562 NA non-coding downstream 83544 967804 ~ 968217 (+)
slc9a7 slc9a7 non-coding downstream 86281 781840 ~ 1244153 (+)
G166 NA other upstream 557257 318047 ~ 319974 (+)
G51 NA other upstream 746968 120466 ~ 130263 (+)
G50 NA other upstream 756924 112959 ~ 120307 (+)
G26 NA other upstream 783513 56555 ~ 93718 (+)
G19 NA other upstream 804932 52711 ~ 72299 (+)
G583 NA other downstream 119523 1003783 ~ 1010207 (+)
G961 NA other downstream 1194638 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 1374623 2258883 ~ 2305334 (+)
G2016 NA other downstream 1760075 2644335 ~ 2645169 (+)
G2343 NA other downstream 2330437 3214697 ~ 3216234 (+)

Expression


Co-expression Network