Gene
RNA
| Item | Value |
|---|---|
| gene id | G1351 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 965062 ~ 967554 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: vegetative cell wall protein gp1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1681 | True | 307 | lncRNA | 0.42 | 2 | 965062 | 967554 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rp2 | LOC106574114 | coding | downstream | 193746 | 749441 ~ 771316 (-) |
| LOC110520928 | jade3 | coding | downstream | 228271 | 702526 ~ 736791 (-) |
| plcxd1 | LOC106574112 | coding | downstream | 283145 | 631974 ~ 681917 (-) |
| LOC118964585 | NA | coding | downstream | 460808 | 502752 ~ 504254 (-) |
| tmem45a | tmem45a | coding | downstream | 659015 | 260364 ~ 306047 (-) |
| chst7 | chst7 | coding | upstream | 48188 | 1015742 ~ 1040056 (-) |
| nipa2 | nipa2 | coding | upstream | 333015 | 1300569 ~ 1311792 (-) |
| nipa1 | nipa1 | coding | upstream | 345952 | 1313506 ~ 1317525 (-) |
| LOC100135976 | LOC100135976 | coding | upstream | 814773 | 1782327 ~ 1821060 (-) |
| si:ch211-201h21.5 | LOC106574205 | coding | upstream | 1001965 | 1969519 ~ 1973362 (-) |
| G1337 | NA | non-coding | downstream | 19181 | 945567 ~ 945881 (-) |
| G1336 | NA | non-coding | downstream | 20110 | 944023 ~ 944952 (-) |
| G1321 | NA | non-coding | downstream | 88179 | 875930 ~ 876883 (-) |
| G1320 | NA | non-coding | downstream | 107971 | 856681 ~ 857091 (-) |
| G1314 | NA | non-coding | downstream | 120326 | 844370 ~ 844736 (-) |
| G1355 | NA | non-coding | upstream | 2852 | 970185 ~ 976099 (-) |
| G1365 | NA | non-coding | upstream | 22357 | 989911 ~ 1012938 (-) |
| G1367 | NA | non-coding | upstream | 31162 | 998716 ~ 1000339 (-) |
| G1373 | NA | non-coding | upstream | 50843 | 1018397 ~ 1021689 (-) |
| G1382 | NA | non-coding | upstream | 86133 | 1053687 ~ 1060337 (-) |
| sft2d2a | sft2b | other | downstream | 721639 | 237111 ~ 243619 (-) |
| G202 | NA | other | downstream | 939389 | 25269 ~ 25673 (-) |
| G1651 | LOC106574119 | other | upstream | 785691 | 1753245 ~ 1760430 (-) |
| G1788 | NA | other | upstream | 1124856 | 2092410 ~ 2097715 (-) |
| G1954 | NA | other | upstream | 1566476 | 2534030 ~ 2534513 (-) |
| G2192 | NA | other | upstream | 1775333 | 2742887 ~ 2743574 (-) |
