G1367


Basic Information

Item Value
gene id G1367
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 998716 ~ 1000339 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1711
TTGAAGCTTCCCACCTTCTCCATTGCGGTTCCGTCAATGTGGATAgtggggtgttccctctgctgtttcctgaagttcacgatcaGCTCCATTGTTTTGTTGAAGTTAGGAGTGAGGTTATTTTAAAGTTCAGCAAGCAATGCGGCTTGACAGGGTCTTGTTACAGAGGATGCATGatcccgagtccgtaggggagttgcagccatgagacaagactgtaattggatatcacgaaaagtAAAAATAATACCCTACAACCCAGCCCCATACAGCTGTTAGAGGTGAATTGCATAACTAAGGCTGTGTCTTCAATGGCTACAGATATGACTATTCCCCACATCTTTTGACCATGGACACATTTTGACAAGTAGAGCACTCTATAAGGAaTTGAGCTTCTCCTCTCACGTCCGTCTCTCTATAGGGAaaagggcgccatttgggatgcgaCCCTAGATCGTTAACACCAGTGAGCTTCTCCTCTCACGTCTGTCTCTCTATAGGGAaaagggcgccatttgggatgcgaCCCTAGATCGTTAACATCAGTGAGCTTCTCCTCTCACGTCTGTCTCTCTATAGGGAaaagggcgccatttgggatgcgaCCCTAGATCGTTAACACCAGTGAGCTTCTCCTCTCACGTGTGTCTGTCTCACACATTCCAGATTCCAGTGGAACAATGTGGCATTCATTCACCCTGCAACGTTCCATAACCCGCCTGCATATAGGATCCACTGTGGACTCTGTCTGTACGTTCGGGACAACACACCCATACAGCCCACACATAGAACATTGGGGATTTGTTCCCTTCAAGAAGGAAGGGATTTGTTCATTAACATTCGAAGCAGATGAGACAAACACTAATGTGTCTGCCTAGAAAACAGAATCCAAATTCCACCCCCAGGACATGCTTGTTCAACCCGCAGCTTGTTGGGTTGGTCTCCTTTGCTGCACAGCTGAACAGAGGACAGGGTGCCATTGGCTTCATAACAGAGATCACAGGAAGAAGGGTCCTGAACATGATTCTCTAGACACTCCTCGAGATAGGAGAGAGTACTACTACATCTAATGCTACTGTAGAAAACCTTGAAGCTTTCTACACTTCCTGGGGTGATGTGTgtgtaacagggttggttatgtttccacttgcctgtaaagaaatgtgtatttcatGTTCAGGCATTCTTATTGGTTAGTTCAACTCTGATGACAATAAGGTGTGTTGTGATTGGCCCCGCTTGCAGATAGGGGGATATCACGAACACCAGGTCTccccagtatgaaaatgtgatgcaaggGGTAGGTCACGTTCTGAAAACTGTTGTCTATTTTCTATTTTACAATGTGTACAAGTTTGCTGTACGTTACTGATTTAGACATGTGTGGGTATATGGTACCTGTTAGGGATTGAGGGGCTTTCTGGG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1711 True 1425 lncRNA 0.54 3 998716 1000339

Neighbor

gene id symbol gene type direction distance location
rp2 LOC106574114 coding downstream 227400 749441 ~ 771316 (-)
LOC110520928 jade3 coding downstream 261925 702526 ~ 736791 (-)
plcxd1 LOC106574112 coding downstream 316799 631974 ~ 681917 (-)
LOC118964585 NA coding downstream 494462 502752 ~ 504254 (-)
tmem45a tmem45a coding downstream 692669 260364 ~ 306047 (-)
chst7 chst7 coding upstream 15403 1015742 ~ 1040056 (-)
nipa2 nipa2 coding upstream 300230 1300569 ~ 1311792 (-)
nipa1 nipa1 coding upstream 313167 1313506 ~ 1317525 (-)
LOC100135976 LOC100135976 coding upstream 781988 1782327 ~ 1821060 (-)
si:ch211-201h21.5 LOC106574205 coding upstream 969180 1969519 ~ 1973362 (-)
G1355 NA non-coding downstream 22617 970185 ~ 976099 (-)
G1351 NA non-coding downstream 31162 965062 ~ 967554 (-)
G1337 NA non-coding downstream 52835 945567 ~ 945881 (-)
G1336 NA non-coding downstream 53764 944023 ~ 944952 (-)
G1321 NA non-coding downstream 121833 875930 ~ 876883 (-)
G1373 NA non-coding upstream 18058 1018397 ~ 1021689 (-)
G1382 NA non-coding upstream 53348 1053687 ~ 1060337 (-)
G1398 NA non-coding upstream 96138 1096477 ~ 1098591 (-)
G1406 NA non-coding upstream 116147 1116486 ~ 1117390 (-)
G1411 NA non-coding upstream 120227 1120566 ~ 1121196 (-)
sft2d2a sft2b other downstream 755293 237111 ~ 243619 (-)
G202 NA other downstream 973043 25269 ~ 25673 (-)
G1651 LOC106574119 other upstream 752906 1753245 ~ 1760430 (-)
G1788 NA other upstream 1092071 2092410 ~ 2097715 (-)
G1954 NA other upstream 1533691 2534030 ~ 2534513 (-)
G2192 NA other upstream 1742548 2742887 ~ 2743574 (-)
G2605 NA other upstream 1978276 2978615 ~ 2978916 (-)

Expression


Co-expression Network