XLOC_019850


Basic Information

Item Value
gene id XLOC_019850
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 43325281 ~ 43325892 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039701
CTCCCACTGGGCTCCAGAAATGTTCTTTTCTCAAGACATGACCAttgtttaaatgacaaaatatgaGACTAAATATTAAtgagttgatttgatttacactATGAAGATTTCAGTAAATAACCAGTTTTTCTATAATTAGAAAATTTGAGAATGTTACTATGGTGTAGGTCttgattattaattttaatgagACAATGTGACATTCTGTGTCCAGATTGGCTGTAAGACCGAGCGATTTCTTCAATGAAGGCTtgatcatgaatattaattaag

Function

GO:

id name namespace
GO:0098659 inorganic cation import across plasma membrane biological_process
GO:0098739 import across plasma membrane biological_process
GO:0099587 inorganic ion import across plasma membrane biological_process
GO:1902710 GABA receptor complex cellular_component
GO:1902711 GABA-A receptor complex cellular_component
GO:0004890 GABA-A receptor activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039701 True 273 lncRNA 0.32 2 43325281 43325892

Neighbor

gene id symbol gene type direction distance location
XLOC_019849 NA coding downstream 73457 43246707 ~ 43251824 (-)
XLOC_019848 hspa4a coding downstream 154032 43137500 ~ 43171249 (-)
XLOC_019847 p4ha2 coding downstream 193529 43097798 ~ 43131752 (-)
XLOC_019846 si:ch73-68b22.2 coding downstream 231071 43080469 ~ 43094210 (-)
XLOC_019845 jakmip2 coding downstream 246120 43029708 ~ 43079161 (-)
XLOC_019851 sowahaa coding upstream 1021 43326913 ~ 43328056 (-)
XLOC_019852 ccni2 coding upstream 53986 43379878 ~ 43398457 (-)
XLOC_019853 AL954767.1 coding upstream 64509 43390401 ~ 43393079 (-)
XLOC_019854 stk26 coding upstream 94412 43420304 ~ 43457554 (-)
XLOC_019855 tmem185 coding upstream 134739 43460631 ~ 43474012 (-)
XLOC_019840 NA non-coding downstream 1169029 42150360 ~ 42156252 (-)
XLOC_019838 NA non-coding downstream 1276476 42043974 ~ 42048805 (-)
XLOC_019831 NA non-coding downstream 1732118 41590870 ~ 41593163 (-)
XLOC_019828 CABZ01034722.1 non-coding downstream 1973616 41351545 ~ 41351665 (-)
XLOC_019864 NA non-coding upstream 358970 43684862 ~ 43700280 (-)
XLOC_019872 NA non-coding upstream 831181 44157073 ~ 44157770 (-)
XLOC_019876 CU855912.1 non-coding upstream 1242288 44568180 ~ 44568266 (-)
XLOC_019879 NA non-coding upstream 1456376 44782268 ~ 44785206 (-)

Expression


Co-expression Network