Gene
RNA
| Item | Value |
|---|---|
| gene id | G1382 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 1053687 ~ 1060337 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1738 | False | 353 | lncRNA | 0.60 | 2 | 1053687 | 1055335 |
| TU1739 | True | 353 | lncRNA | 0.41 | 2 | 1053687 | 1060337 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| chst7 | chst7 | coding | downstream | 13631 | 1015742 ~ 1040056 (-) |
| rp2 | LOC106574114 | coding | downstream | 282371 | 749441 ~ 771316 (-) |
| LOC110520928 | jade3 | coding | downstream | 316896 | 702526 ~ 736791 (-) |
| plcxd1 | LOC106574112 | coding | downstream | 371770 | 631974 ~ 681917 (-) |
| LOC118964585 | NA | coding | downstream | 549433 | 502752 ~ 504254 (-) |
| nipa2 | nipa2 | coding | upstream | 240232 | 1300569 ~ 1311792 (-) |
| nipa1 | nipa1 | coding | upstream | 253169 | 1313506 ~ 1317525 (-) |
| LOC100135976 | LOC100135976 | coding | upstream | 721990 | 1782327 ~ 1821060 (-) |
| si:ch211-201h21.5 | LOC106574205 | coding | upstream | 909182 | 1969519 ~ 1973362 (-) |
| zgc:172121 | mmum | coding | upstream | 917266 | 1977603 ~ 1984335 (-) |
| G1373 | NA | non-coding | downstream | 31998 | 1018397 ~ 1021689 (-) |
| G1365 | NA | non-coding | downstream | 40749 | 989911 ~ 1012938 (-) |
| G1367 | NA | non-coding | downstream | 53348 | 998716 ~ 1000339 (-) |
| G1355 | NA | non-coding | downstream | 77588 | 970185 ~ 976099 (-) |
| G1351 | NA | non-coding | downstream | 86133 | 965062 ~ 967554 (-) |
| G1398 | NA | non-coding | upstream | 36140 | 1096477 ~ 1098591 (-) |
| G1406 | NA | non-coding | upstream | 56149 | 1116486 ~ 1117390 (-) |
| G1411 | NA | non-coding | upstream | 60229 | 1120566 ~ 1121196 (-) |
| G1412 | NA | non-coding | upstream | 61417 | 1121754 ~ 1122431 (-) |
| G1441 | NA | non-coding | upstream | 140903 | 1201240 ~ 1201801 (-) |
| sft2d2a | sft2b | other | downstream | 810264 | 237111 ~ 243619 (-) |
| G202 | NA | other | downstream | 1028014 | 25269 ~ 25673 (-) |
| G1651 | LOC106574119 | other | upstream | 692908 | 1753245 ~ 1760430 (-) |
| G1788 | NA | other | upstream | 1032073 | 2092410 ~ 2097715 (-) |
| G1954 | NA | other | upstream | 1473693 | 2534030 ~ 2534513 (-) |
| G2192 | NA | other | upstream | 1682550 | 2742887 ~ 2743574 (-) |
| G2605 | NA | other | upstream | 1918278 | 2978615 ~ 2978916 (-) |
