G674


Basic Information

Item Value
gene id G674
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 1253014 ~ 1254747 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU836
tatcttacctcatttgcacacactgtttatagactttttatattgtattattgactgtatgtttgttttactccatgtgtaactctgtgttgtttgtgctGCACTGCTTtggtttatcttggccaggtcgcagttgtaaatgggaacttgttctcaacttgcctacctggttaaataaaggtgaaattaattaATGAATTAAAAAACTGTGAAATATTTACTTACCCTTAACCATCAAAGCAGttcaagaaaatatttactgaataaacaaaagtaaaaaaaatataaaaagtaacagaataaaataaaaataacgaGGCTTTAGACAAgggctaccggtaccgagtcaatgtgtgggagtacaggttagtaatgaggctatatacaagggctaccggtaccgagtcaatgtgtgggagtacaggttagtaatgaggctatgtacaagggctaccggtaccgagtcaatgtgtgggagtacaggttagtaatgaggctttATACAAgggctaccggtaccgagtcaatgtgtgggagtacaggttagtaatgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU836 True 554 lncRNA 0.37 2 1253014 1254747

Neighbor

gene id symbol gene type direction distance location
tubgcp5 tubgcp5 coding upstream 119106 1089396 ~ 1133908 (+)
slc9a7 slc9a7 coding upstream 280905 781840 ~ 1244153 (+)
nit2 nit2 coding upstream 635419 602103 ~ 617595 (+)
tbc1d23 tbc1d23 coding upstream 755886 439965 ~ 497128 (+)
LOC110532027 tomm70 coding upstream 831781 384207 ~ 421233 (+)
LOC118964682 NA coding downstream 72575 1327322 ~ 1328266 (+)
gabrb3 LOC107673538 coding downstream 79350 1334097 ~ 1398380 (+)
atp10a atp10a coding downstream 205320 1460067 ~ 1596619 (+)
LOC110520782 LOC106574119 coding downstream 478042 1732789 ~ 1770434 (+)
tmem131 LOC102783117 coding downstream 604630 1859377 ~ 1967576 (+)
G669 NA non-coding upstream 7250 1244357 ~ 1245764 (+)
G663 NA non-coding upstream 27487 1225094 ~ 1225527 (+)
G571 yo84 non-coding upstream 207760 988089 ~ 1045254 (+)
G583 NA non-coding upstream 242807 1003783 ~ 1010207 (+)
G678 NA non-coding downstream 12605 1267352 ~ 1268360 (+)
G679 NA non-coding downstream 12649 1267396 ~ 1268081 (+)
G683 NA non-coding downstream 54021 1308768 ~ 1309548 (+)
G649 NA non-coding downstream 60660 1315407 ~ 1315653 (+)
G696 NA non-coding downstream 81567 1336314 ~ 1348949 (+)
G166 NA other upstream 933040 318047 ~ 319974 (+)
G51 NA other upstream 1122751 120466 ~ 130263 (+)
G50 NA other upstream 1132707 112959 ~ 120307 (+)
G26 NA other upstream 1159296 56555 ~ 93718 (+)
G961 NA other downstream 824151 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 1004136 2258883 ~ 2305334 (+)
G2016 NA other downstream 1389588 2644335 ~ 2645169 (+)
G2343 NA other downstream 1959950 3214697 ~ 3216234 (+)
G2464 NA other downstream 2248522 3503269 ~ 3503581 (+)

Expression


Co-expression Network