XLOC_019855 (tmem185)


Basic Information

Item Value
gene id XLOC_019855
gene name tmem185
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 43460631 ~ 43474012 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039064
GATGTGAGTGCCAGTCAGCTAGCCAGCCTCTCCTTTTCAGTTCATGTAACTATGGTCTGAAGAGGAAACCATGAATCTCCGAGGCGTTTTTCAAGATTTCAACCCCAGTAAGTTCCTGATCTACGCGTGTCTGCTGCTCTTCTCTGTGCTGCTGTCACTGAGGCTGGATGGCATCATCCAGTGGAGCTACTGGGCCGTGTTTGCGCCCATCTGGCTCTGGAAGCTCATGGTCATCATCGGGGCGTCTGTGGGCACTGGAGTGTGGGCTCACAACCCGCAGTACAGGGCTGAAGGGGAGACGTGTGTGGAGTTTAAGGCCATGCTGATCGCAGTGGGAATCCACCTGCTCCTGCTCACCTTCGAGGTGCTGGTCTGCGAGCGCGTGGAACGGGCTTCGATCCCCTACTGGCTCCTGGTGTTCATGCCGCTCTTCTTCGTCTCTCCGGTGTCAGTGGCCGCGTGTGTGTGGGGATTCAGACACGACCGCTCGCTGGAGCTGGAGATTCTGTGCTCTGTAAATATTCTTCAGTTTATCTTCATCGCTCTGAAACTGGACGGGATCATCAGCTGGCCGTGGCTGGTGGTGTGTGTGCCGCTCTGGATCCTCATGTCCTTCTTGTGTCTGGTGGTCCTCTATTATATCGTGTGGTCTGTGCTGTTTCTGCGCTCCATGGATGTGATCGCGGAGCAGCGGCGCACACACATCACCATGGCCATCAGCTGGATGACTATAGTCGTGCCCCTGCTCACTTTTGAGATTCTCCTCGTCCACAAGCTGGATAATCATTATAGCCCCAACTACGTCCCGGTGTTTGTTCCTCTCTGGGTTTCTTTAGTGACTCTAATGGTGACCACATTTGGCCAGAAAGGAGGCAATCACTGGTGGTTTGGCATCCGTAAAGACTTCTGCCAGTTCCTACTGGAGCTCTTCCCGTTCCTCAGGGAATATGGCAACATCTCCTATGACCTGCATCACGAGGACTCAGACATGTCCGAGGAGTTGCCCATTCACGAGGTGCCCAAAATCCCAACCATGTTTCGTAAGAAGACGGGGGTGGTGATCACCCAAAGCCCTGGGAAATACTTTGTGCCCCCACCCAAACTGTGCATCGACATGCCAGACTAACATTGGAGCTCTCGTATACAGTATAGCACTATGCACTGGGATTCGCTTTGTTACGTACTGTTGAAGACGGAAACAACAATCCCATTAAACTCGGCTCTTGTTTCCTAAAAAAATAGCTGCGCAAACGGACCTGTTGACATCAGGAGCGCATCGGTCGAAATTTCCTGACCACTCACTCGAAGGACTCCCAGAGACAGACTGTctgtaaataagtgtgttttttaCAAGGTGTcagatattttctgtattttaaacgAAATGTCCATCGCTCTTAGGTTTTCTAGCTTCGCTAGCACTGTACTGAATGGATTTCATGACAGTTCCTCATTTATACTGGGATCGCAGTGTTTGCGGTAGAAGAACAACTCTGTGAAAAATAGCCGTAAATGAAGAGTTGACCGTATTTTGTGAGTCCtgcttatttatgcttttgaattgctttaTTATTGATCTTTCCTGCAAAGATTTATGATGTTGAACAGTTTGAAATAGTGacttttattaagattttataTAGTCTTTATttgggttgtcacaatactgaaatTTGGTACCAATCTCTACTGAAATTTTGTCTATTTCCTTCTAACATTTAagtgcgttcttaaacagcgctgatttgttATTaagttcacatgctcaacagaaatgactgtgattggctgtgaagatAAGCTGATGGACCGATCTTCactgctttaaaacactccagtgtccctgtatctgtggttacactgagtaaacagaggtgagtttggtgaactgatgaccttcacggccaatcacagtcatttctgttgagcatgtgaacacaatggcaaatcagtgctgtttaagaacgcacacaacagcgctcaaatgttagcaggaaattgacatttttaatatttcagtatagATTGGTACCGAATTTTTAGTATCCTGACACTAGTCAAGAGGTGTCAAAACTTAGTTCCCGGGGGTTTAGTTTTAACCCTGCTCCAACATGCTTACATGTAGGTTTCAAACTAATCTGAAGGACTCAAATAGTTTGATCAAGTgtctttaattagggttggaactaaactgcgcagagctgcggcccttcaggaattgagttggACAGCTGTGCACTGGTCTGTATCAGTGTATGGTGCAAAAACCTGCTAATGtttctgttattatacagactaaTCTCTATATATAGAATTCCTTATGCAAAAACATGTTTCAAACTGCTAAATtgtcattaaaagtcactttaaagaGTGCTAAATTTTCAATATCATATATCAACACCGCAGGAataaaggtcccataatgcaattcacaagtgTAAATAAACAGTATGACAATAAAgcagtgaatcacaaaata
>TCONS_00039065
AGTCAGCTAGCCAGCCTCTCCTTTTCAGTTCATGTAACTATGGTCTGAAGAGGAAACCATGAATCTCCGAGGCGTTTTTCAAGATTTCAACCCCAGTAAGTTCCTGATCTACGCGTGTCTGCTGCTCTTCTCTGTGCTGCTGTCACTGAGGCTGGATGGCATCATCCAGTGGAGCTACTGGGCCGTGTTTGCGCCCATCTGGCTCTGGAAGCTCATGGTCATCATCGGGGCGTCTGTGGGCACTGGAGTGTGGGCTCACAACCCGCAGTACAGGGCTGAAGGGGAGACGTGTGTGGAGTTTAAGGCCATGCTGATCGCAGTGGGAATCCACCTGCTCCTGCTCACCTTCGAGGTGCTGGTCTGCGAGCGCGTGGAACGGGCTTCGATCCCCTACTGGCTCCTGGTGTTCATGCCGCTCTTCTTCGTCTCTCCGGTGTCAGTGGCCGCGTGTGTGTGGGGATTCAGACACGACCGCTCGCTGGAGGTATTCACAGCCATAGAATACCGCTCTGTAACCGCGTCTCAATTCGCATGCAACCTGTTctaaatagtattcaaaaatagaattaatatgATCGGGAGGATCAGTCAGACGCGCTGGAAAACAAGAGCCACCTCGACACACACTCAGCTTCCGCTTATAAAGGCGACAAGCCAAATTAGCTGCAGGTGCAACGCGGAGCCAGCCTCAAAGAAAAGAAACCGCAATTA

Function

symbol description
tmem185 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to several human genes including TMEM185A (transmembrane protein 185A).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1167 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to several human genes including TMEM185A (transmembrane protein 185A).

Ensembl:

ensembl_id ENSDARG00000044327

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039064 False 2482 mRNA 0.45 7 43460631 43474012
TCONS_00039065 True 711 lncRNA 0.54 3 43469329 43474000

Neighbor

gene id symbol gene type direction distance location
XLOC_019854 stk26 coding downstream 3077 43420304 ~ 43457554 (-)
XLOC_019852 ccni2 coding downstream 62174 43379878 ~ 43398457 (-)
XLOC_019853 AL954767.1 coding downstream 67552 43390401 ~ 43393079 (-)
XLOC_019851 sowahaa coding downstream 132575 43326913 ~ 43328056 (-)
XLOC_019850 NA coding downstream 134739 43325281 ~ 43325892 (-)
XLOC_019856 ankrd46a coding upstream 1734 43475746 ~ 43485351 (-)
XLOC_019857 irs4a coding upstream 41661 43515673 ~ 43527198 (-)
XLOC_019858 si:ch73-362m14.2 coding upstream 62327 43536339 ~ 43550120 (-)
XLOC_019859 si:ch73-362m14.4 coding upstream 107329 43581341 ~ 43606502 (-)
XLOC_019860 htr2cl2 coding upstream 135440 43609452 ~ 43616586 (-)
XLOC_019849 NA non-coding downstream 208807 43246707 ~ 43251824 (-)
XLOC_019840 NA non-coding downstream 1304379 42150360 ~ 42156252 (-)
XLOC_019838 NA non-coding downstream 1411826 42043974 ~ 42048805 (-)
XLOC_019864 NA non-coding upstream 210850 43684862 ~ 43700280 (-)
XLOC_019872 NA non-coding upstream 683061 44157073 ~ 44157770 (-)
XLOC_019876 CU855912.1 non-coding upstream 1094168 44568180 ~ 44568266 (-)
XLOC_019879 NA non-coding upstream 1308256 44782268 ~ 44785206 (-)
XLOC_019881 NA non-coding upstream 1647350 45121362 ~ 45123821 (-)

Expression


Co-expression Network