G836


Basic Information

Item Value
gene id G836
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 1767838 ~ 1768365 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1056
gtttattttcagcaaacttaacatgtgtaaatatttctatATGTACCCGTCTCTTGTTTTCTAACTCCTTCTACACCCCCTGATGTACCCGTCTCTTGTATTCTAACTCCTTCTACACCCCCTGATGTACCCGTCTCTTGTATTCTAACTCCTTCTACACCCCCTGATGTACCCGTCTCTTGTATTCTAACTCCTTCTACACCCCCTGATGTACCCGTCTCTTGTATTCTAACTCCTTCTACACCCCCTGATGTACCCGTCTCTTGTATTCTAACTCCTTCTACACCCCCTGATGTACCCGTCTCTTGTATTCTAACTCCTTCTACACCCCCTGATGTACCCGTCTCTTGTATTCTAACTCCTTCTACACCCCCTGATGTACCCGTCTCTTGTTTTCTAACT

Function

NR:

description
ubiquitin-protein ligase E3A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1056 True 402 lncRNA 0.38 2 1767838 1768365

Neighbor

gene id symbol gene type direction distance location
atp10a atp10a coding upstream 171219 1460067 ~ 1596619 (+)
gabrb3 LOC107673538 coding upstream 369458 1334097 ~ 1398380 (+)
LOC118964682 NA coding upstream 439572 1327322 ~ 1328266 (+)
cyfip1 LOC106590724 coding upstream 467214 1173711 ~ 1300624 (+)
tubgcp5 tubgcp5 coding upstream 633930 1089396 ~ 1133908 (+)
tmem131 LOC102783117 coding downstream 91012 1859377 ~ 1967576 (+)
nme7 at233 coding downstream 215961 1984326 ~ 2101039 (+)
dpt LOC106574207 coding downstream 408307 2176672 ~ 2192895 (+)
zbtb11 LOC106560622 coding downstream 443770 2212135 ~ 2258325 (+)
LOC110531937 LOC106574099 coding downstream 769969 2538334 ~ 2580308 (+)
G824 NA non-coding upstream 16627 1739281 ~ 1751211 (+)
G792 NA non-coding upstream 42018 1618268 ~ 1725820 (+)
G805 NA non-coding upstream 43782 1711284 ~ 1724056 (+)
G799 NA non-coding upstream 45555 1697646 ~ 1722283 (+)
G808 NA non-coding upstream 64100 1692275 ~ 1703738 (+)
G848 NA non-coding downstream 42303 1810668 ~ 1811153 (+)
G901 NA non-coding downstream 128401 1896766 ~ 1897519 (+)
G927 NA non-coding downstream 209742 1978107 ~ 1978417 (+)
G938 NA non-coding downstream 242577 2010942 ~ 2044901 (+)
G943 NA non-coding downstream 250725 2019090 ~ 2019513 (+)
G583 NA other upstream 757631 1003783 ~ 1010207 (+)
G166 NA other upstream 1447864 318047 ~ 319974 (+)
G51 NA other upstream 1637575 120466 ~ 130263 (+)
G50 NA other upstream 1647531 112959 ~ 120307 (+)
G26 NA other upstream 1674120 56555 ~ 93718 (+)
G961 NA other downstream 310533 2078898 ~ 2079603 (+)
G998 LOC106576565 other downstream 490518 2258883 ~ 2305334 (+)
G2016 NA other downstream 875970 2644335 ~ 2645169 (+)
G2343 NA other downstream 1446332 3214697 ~ 3216234 (+)
G2464 NA other downstream 1734904 3503269 ~ 3503581 (+)

Expression


Co-expression Network