Gene
RNA
| Item | Value |
|---|---|
| gene id | G1788 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 2092410 ~ 2097715 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2330 | False | 254 | lncRNA | 0.48 | 3 | 2092410 | 2097715 |
| TU2331 | True | 407 | TUCP | 0.47 | 2 | 2092410 | 2097124 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:172121 | mmum | coding | downstream | 108075 | 1977603 ~ 1984335 (-) |
| si:ch211-201h21.5 | LOC106574205 | coding | downstream | 119048 | 1969519 ~ 1973362 (-) |
| LOC100135976 | LOC100135976 | coding | downstream | 271350 | 1782327 ~ 1821060 (-) |
| nipa1 | nipa1 | coding | downstream | 774885 | 1313506 ~ 1317525 (-) |
| nipa2 | nipa2 | coding | downstream | 780618 | 1300569 ~ 1311792 (-) |
| atp1b1a | at233 | coding | upstream | 2457 | 2100172 ~ 2130819 (-) |
| tp63 | NA | coding | upstream | 161516 | 2259231 ~ 2387305 (-) |
| LOC118964912 | NA | coding | upstream | 364568 | 2462283 ~ 2477190 (-) |
| LOC110531934 | LOC106574222 | coding | upstream | 518868 | 2616583 ~ 2618583 (-) |
| LOC110523943 | LOC106573992 | coding | upstream | 538947 | 2636662 ~ 2815077 (-) |
| G1786 | NA | non-coding | downstream | 1155 | 2086821 ~ 2091255 (-) |
| G1781 | NA | non-coding | downstream | 12749 | 2078939 ~ 2079661 (-) |
| G1741 | NA | non-coding | downstream | 106485 | 1985454 ~ 1985925 (-) |
| G1733 | NA | non-coding | downstream | 115136 | 1976880 ~ 1977274 (-) |
| G1732 | NA | non-coding | downstream | 115606 | 1976446 ~ 1976804 (-) |
| G1791 | NA | non-coding | upstream | 3805 | 2101520 ~ 2102387 (-) |
| G1784 | NA | non-coding | upstream | 16631 | 2114346 ~ 2117514 (-) |
| G1797 | NA | non-coding | upstream | 37820 | 2135535 ~ 2135740 (-) |
| G1799 | NA | non-coding | upstream | 40498 | 2138213 ~ 2138425 (-) |
| G1807 | NA | non-coding | upstream | 47660 | 2145375 ~ 2192890 (-) |
| G1651 | LOC106574119 | other | downstream | 331980 | 1753245 ~ 1760430 (-) |
| G1355 | NA | other | downstream | 1116311 | 970185 ~ 976099 (-) |
| plcxd1 | LOC106574112 | other | downstream | 1410514 | 631974 ~ 681917 (-) |
| sft2d2a | sft2b | other | downstream | 1848987 | 237111 ~ 243619 (-) |
| G202 | NA | other | downstream | 2066737 | 25269 ~ 25673 (-) |
| G1954 | NA | other | upstream | 436315 | 2534030 ~ 2534513 (-) |
| G2192 | NA | other | upstream | 645172 | 2742887 ~ 2743574 (-) |
| G2605 | NA | other | upstream | 880900 | 2978615 ~ 2978916 (-) |
| G2730 | NA | other | upstream | 1241998 | 3339713 ~ 3341868 (-) |
| G2749 | NA | other | upstream | 1287591 | 3385306 ~ 3388215 (-) |
