Gene
RNA
| Item | Value |
|---|---|
| gene id | G1936 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 2456072 ~ 2533667 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2532 | False | 386 | lncRNA | 0.50 | 2 | 2456072 | 2533667 |
| TU2534 | True | 306 | lncRNA | 0.39 | 2 | 2456072 | 2530239 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zbtb11 | LOC106560622 | coding | upstream | 197747 | 2212135 ~ 2258325 (+) |
| dpt | LOC106574207 | coding | upstream | 263177 | 2176672 ~ 2192895 (+) |
| nme7 | at233 | coding | upstream | 357388 | 1984326 ~ 2101039 (+) |
| tmem131 | LOC102783117 | coding | upstream | 488496 | 1859377 ~ 1967576 (+) |
| LOC110520782 | LOC106574119 | coding | upstream | 685638 | 1732789 ~ 1770434 (+) |
| LOC110531937 | LOC106574099 | coding | downstream | 4667 | 2538334 ~ 2580308 (+) |
| LOC118966170 | NA | coding | downstream | 865759 | 3399426 ~ 3400148 (+) |
| bcl6aa | LOC106574104 | coding | downstream | 1068996 | 3602663 ~ 3624582 (+) |
| LOC118965227 | NA | coding | downstream | 1289469 | 3822517 ~ 3826226 (+) |
| trnap-cgg | NA | coding | downstream | 1313956 | 3847623 ~ 3847694 (+) |
| G1934 | NA | non-coding | upstream | 4009 | 2451849 ~ 2452063 (+) |
| G1929 | NA | non-coding | upstream | 19965 | 2435855 ~ 2436107 (+) |
| G1115 | NA | non-coding | upstream | 59811 | 2392794 ~ 2396261 (+) |
| G1094 | NA | non-coding | upstream | 97346 | 2357682 ~ 2358726 (+) |
| G1085 | NA | non-coding | upstream | 115650 | 2339440 ~ 2340422 (+) |
| G1957 | NA | non-coding | downstream | 1916 | 2535583 ~ 2535795 (+) |
| G1958 | NA | non-coding | downstream | 2478 | 2536145 ~ 2536461 (+) |
| G1959 | NA | non-coding | downstream | 3080 | 2536747 ~ 2537044 (+) |
| G1961 | NA | non-coding | downstream | 3858 | 2537525 ~ 2537754 (+) |
| G2004 | LOC106574222 | non-coding | downstream | 82902 | 2616569 ~ 2618562 (+) |
| G998 | LOC106576565 | other | upstream | 192507 | 2258883 ~ 2305334 (+) |
| G961 | NA | other | upstream | 376469 | 2078898 ~ 2079603 (+) |
| G583 | NA | other | upstream | 1445865 | 1003783 ~ 1010207 (+) |
| G166 | NA | other | upstream | 2136098 | 318047 ~ 319974 (+) |
| G51 | NA | other | upstream | 2325809 | 120466 ~ 130263 (+) |
| G2016 | NA | other | downstream | 110668 | 2644335 ~ 2645169 (+) |
| G2343 | NA | other | downstream | 681030 | 3214697 ~ 3216234 (+) |
| G2464 | NA | other | downstream | 969602 | 3503269 ~ 3503581 (+) |
| G3176 | NA | other | downstream | 1641656 | 4175323 ~ 4178073 (+) |
| G3234 | NA | other | downstream | 1865237 | 4398904 ~ 4399444 (+) |
