Gene
RNA
| Item | Value |
|---|---|
| gene id | G1954 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 2534030 ~ 2534513 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC108183448 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2559 | True | 484 | TUCP | 0.50 | 1 | 2534030 | 2534513 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964912 | NA | coding | downstream | 56840 | 2462283 ~ 2477190 (-) |
| tp63 | NA | coding | downstream | 146725 | 2259231 ~ 2387305 (-) |
| atp1b1a | at233 | coding | downstream | 403211 | 2100172 ~ 2130819 (-) |
| zgc:172121 | mmum | coding | downstream | 549695 | 1977603 ~ 1984335 (-) |
| si:ch211-201h21.5 | LOC106574205 | coding | downstream | 560668 | 1969519 ~ 1973362 (-) |
| LOC110531934 | LOC106574222 | coding | upstream | 82070 | 2616583 ~ 2618583 (-) |
| LOC110523943 | LOC106573992 | coding | upstream | 102149 | 2636662 ~ 2815077 (-) |
| LOC118966169 | NA | coding | upstream | 467796 | 3002309 ~ 3003994 (-) |
| LOC110518923 | LOC105011323 | coding | upstream | 488097 | 3022610 ~ 3524283 (-) |
| LOC118964935 | NA | coding | upstream | 756671 | 3291184 ~ 3294574 (-) |
| G1943 | NA | non-coding | downstream | 431 | 2456072 ~ 2533599 (-) |
| G1947 | NA | non-coding | downstream | 61652 | 2469641 ~ 2472378 (-) |
| G1946 | NA | non-coding | downstream | 62749 | 2467819 ~ 2471281 (-) |
| G1945 | NA | non-coding | downstream | 68041 | 2465423 ~ 2465989 (-) |
| G1944 | NA | non-coding | downstream | 75715 | 2457581 ~ 2458315 (-) |
| G1955 | NA | non-coding | upstream | 49 | 2534562 ~ 2534845 (-) |
| G1956 | NA | non-coding | upstream | 370 | 2534883 ~ 2535131 (-) |
| G2115 | LOC106574099 | non-coding | upstream | 43840 | 2578353 ~ 2579757 (-) |
| G2110 | NA | non-coding | upstream | 90484 | 2624997 ~ 2698384 (-) |
| G2171 | NA | non-coding | upstream | 160642 | 2695155 ~ 2696055 (-) |
| G1788 | NA | other | downstream | 436906 | 2092410 ~ 2097715 (-) |
| G1651 | LOC106574119 | other | downstream | 773600 | 1753245 ~ 1760430 (-) |
| G1355 | NA | other | downstream | 1557931 | 970185 ~ 976099 (-) |
| plcxd1 | LOC106574112 | other | downstream | 1852134 | 631974 ~ 681917 (-) |
| sft2d2a | sft2b | other | downstream | 2290607 | 237111 ~ 243619 (-) |
| G2192 | NA | other | upstream | 208374 | 2742887 ~ 2743574 (-) |
| G2605 | NA | other | upstream | 444102 | 2978615 ~ 2978916 (-) |
| G2730 | NA | other | upstream | 805200 | 3339713 ~ 3341868 (-) |
| G2749 | NA | other | upstream | 850793 | 3385306 ~ 3388215 (-) |
| G2772 | NA | other | upstream | 907825 | 3442338 ~ 3444099 (-) |
