XLOC_019870 (FO704810.1)


Basic Information

Item Value
gene id XLOC_019870
gene name FO704810.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 44041088 ~ 44081540 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039091
ACAGAAGTGAAAGCTGTTTGATGAAATTCAGTACATACTGAGGGCTACTTAAGAACTGAGATGTCTGTGCCTGGTCCACCTGATGTCATACCTGTGCCAAAGCCGCGagcaaaatatttatttgggAAATCTTTAGCACAGCAACCCTCCATCGAGAGAAATGGTGATGCTCCTTTGCCTCCTCCTGATGTTCAGATCAATACACAGATGAAAACTCAAGaaacgGACATCCAACATGAGGCTAGTGTGGACGGTTCATCTCATCAGTCGACATCCGCTTCTGTTCCCCCTGATCTTCTAGATGTTAAAAGCAGTGAAACGTTAGTGTGGCCGTCTTCGATCTCCATCAGCTCCGGTTTATCAGTGGAAGCACTGAGGTCTGCTGATTCGGATGATTCCCCTGCGGCTTCAGACTCGCCAAAAACACATCAGCATCTCTCTAAAGGCCAACACAATGTACAGAAAGCAAGTAAAACAGATAAGCTGACGGATGTTCAGTGGGCCAATGAAGAGATCCATCTCCAATCAGAGAGCCTTCAGAAAATGCCTGACAGACCCAAGAAACCACGGGCTGCAACCATTCGTGTGAGTAGGAAGAAGCAAACATTATCAGGGCAGAAATCAGACCAGACTCGCAGTGAGTTTACCGTGTCTCAGTCCAGCTGGCTTGACGTGTGGAAAGGACGCAAGCACATGGTACTTTGGGCCACTCTAGACGGGAATCTGATGTCAATGTGGAAAAAACGCACAGACAAATTCACAGAGTATGTGTTTCATGTTGCGAGTGTCACCAACATAAGCAAGCAGGAACACGGACGCTTCTCCATCCATTTACAGAAGAAGCACTTTGAGTTCATGGCTCACAACGCAGCTGTGCAGGACGGCTGGTTGCACTCTCTTTATGACAGTCGTGGAAGGGAAGCGATCGCCGCACCCAAAAAACACGGACCGCTAAGCATGAAAGACCGACGTAAAAAAGTCTACTCCGCTATCTGTGGACACTCCCTTTGGATTTACAGCAGCAAAGAGGACTTCAATCTAGGTCTCGGCATGATGTGTGTGTCTATGAATATCGCGTCTGTGAAGTCCACAGGACGCTACGGCTTCAGTCTCATTACCCCATACAGGACCTTTAATTTTTCTGCAGACTCCAGTAAAGAGGCGAGCGCGTGGCTGGAGAGTCTGAATGACGTGATCCGCAACGCTCTGTCCTACAGCGAGGTGGCGCTCCGGCTGTGGTCCAGTCCCTGTAATAAGGTCTGCGCTGACTGTGGCGCCGCCAACCCAGAGTGGGCATCGGTGAACCTGCTGGTGGTCATCTGTGAGGCCTGTGCGGGCGCACATCGCTCCATGGGCAGCAGCCGCTCCAAAGTCAGAGGCCTGAAACTAGATGATAAGGTTTGGACCGAGCCTTTAATTCAGCTGTTTGTCCTGCACGGCAATAAAACTGCCAACAATGTTTGGGGTCACAACATCCCTCCGACTGAGCAGATCAGCCCCCTCGCCTCTCCAGACCAGAGGGCGGAGTTCATTCTGGCTAAATACCACAAAGGACTTTACCGTAAAGCTCACCCTCTCGCCGCCAGCCAGAAACTGCTGGACCAGAGGCTGCGGGAGGTGGTGTGTGGACCCGCTGTGGAGGAAACCGTGTCTCTGCTTTGCTCCGGAGCGAAAGTGTCCTGCAGCAGCTCGGATCCAGAGCTGAAATCCGCCATCGCTGTGGCCGAGAGCGCGGGACAGGCCCTGCAGACTGAACTGCTGCGTCACAATGAGTTTGTGGAGGCTCCTGACTTTGAGCAGACGAGACATTCAGAGGAGCAGATGGAGGAGCTGCATGGGAAGCTGGATGAGGAGCGTTTCTTGTTCTCTCAGGAGAACCAGTCTGCAGCCTATGATGTGCTGGATTTAACAGAGGTGGTCTCAGTGTTCGACTGCTCTGACGGGGAGACTCATCAGTTTGAGGTGTCCACGCTGACCGACAGACTGACCTGCTCTGCTGATGAACGCAACGCTCTGCTCAGTCACATGACGCACATCATGAAGGTTGTTCTTGCAGATACTGTAAAGCAGGACGATCTGCTGGGAGTGTTTGCCGTGTCCAAACTCTCGATTCGGGAAGGCGCTGCTCTTCAGTTTGCTGAGGTCTGGTGTTCGCTTCAGGAAGGAGAGATGAGCGTACACACACTACAGCTCCGCTCCAGAGAAACGCTGATCCTGAACGCCCAGACACGCTGCTATCTGCAGAGCTCAGAGAACTGCATCCTACTGGAGTTTCCTGACAGGACGTTTCACATGCAGTTTGAGCTGGAGCACAGCTGCCGCAGGTGGCATGAGCTGCTACAGAAAGCCATGAGCTCCAGCACAGACGGGCAGCAGAGGGCAGGATCTGTGCCCACTTCTGTCCACCGCTGCATCTCCCACATCACACTGCACGGGTTGATGGTGGAGGGATTGTACCGGCGGTGTGGCATCGCTCCTCAGATCAGTAAACTGGTGGACACCCTGCGTGTTTCTCCAAAAGAAGCTGTTCTGCAAACCGACGAGCTCTCCGTGCTGGACGTTTCCGGAGCGCTGAAGCAGATCCTCCGACAGAGCGAGCTCATCCCACAAACACACAGACCACACTGGCAAAACGCAGCAGCTCTGCCAGGGGAAAAGGTCCGTCTGCAAACGTATAGAGAACTGCTGAAACAGCTTCCTCCAGACAACATCGCTACACTGAGTGCTCTCTGTGCACACCTCAACAACGTGCAGAAGCACAGTCAAACCAACCGCATGACGGCTCATAATCTGGCCGTGATCTTCGTGGTCATATTCTTCCAGGAGCTGGCCATGAACATAAACATGGTGCAGATGACCCGGGAGCTGATCCTGAACCACACACACATCTTCAGGAGTCCTGTGGAGACAGACGGAGCCATCGTCACTGTATTCTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000087492

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039091 True 2937 mRNA 0.53 23 44041088 44081540

Neighbor

gene id symbol gene type direction distance location
XLOC_019869 ndufa2 coding downstream 31919 44005521 ~ 44009169 (-)
XLOC_019868 arsib coding downstream 37631 43999699 ~ 44003457 (-)
XLOC_019867 cdx1b coding downstream 49061 43976075 ~ 43992027 (-)
XLOC_019866 camk2a coding downstream 88130 43897128 ~ 43952958 (-)
XLOC_019865 pdlim4 coding downstream 239577 43738398 ~ 43801511 (-)
XLOC_019871 oatx coding upstream 9802 44091342 ~ 44104600 (-)
XLOC_019872 NA coding upstream 75533 44157073 ~ 44157770 (-)
XLOC_019873 zgc:136410 coding upstream 424073 44505613 ~ 44512893 (-)
XLOC_019874 brcc3 coding upstream 465910 44547450 ~ 44556411 (-)
XLOC_019875 fundc2 coding upstream 476251 44557791 ~ 44565862 (-)
XLOC_019864 NA non-coding downstream 340808 43684862 ~ 43700280 (-)
XLOC_019853 AL954767.1 non-coding downstream 648009 43390401 ~ 43393079 (-)
XLOC_019850 NA non-coding downstream 715196 43325281 ~ 43325892 (-)
XLOC_019849 NA non-coding downstream 789264 43246707 ~ 43251824 (-)
XLOC_019840 NA non-coding downstream 1884836 42150360 ~ 42156252 (-)
XLOC_019876 CU855912.1 non-coding upstream 486640 44568180 ~ 44568266 (-)
XLOC_019879 NA non-coding upstream 700728 44782268 ~ 44785206 (-)
XLOC_019881 NA non-coding upstream 1039822 45121362 ~ 45123821 (-)
XLOC_019882 NA non-coding upstream 1083274 45164814 ~ 45188233 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G154586 NA non-coding NC_053126.1 CM020923.1 13234113 ~ 13234321 (+)