XLOC_019871 (oatx)


Basic Information

Item Value
gene id XLOC_019871
gene name oatx
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 44091342 ~ 44104600 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039092
ATGGGCTTTGCGGATCTTTTGGATGAAGTCGGCGGGTTTGGACGCTTTCAGATGATTCACGTCACTCTGCTCTCCATCCCAGGTCTTCTAATGGCTAGCCAGAATTTACTGAATAACTTCACTGCTGGCGTGCCGGAGCATCATTGTCGCATACCCAATGTAACGACTGCAATGAATGACAGCACAACAACCCTCCTGCGTGCATTTATCCCGCTGGATTCCTCCTTAACGCTGTCCAAATGCTCCCGGTACAAAGATACTCAGTGGCATTTAATCACAGACAAACTGAGTCATGGAAATGCGACGGAACTGCAAACAGAGGGTTGTGCCGATGGCTGGACATACGACAAGTCTGAATTCATCTCATCTATTGTGTCAGAAtcaactcTTGTATGCGACACAGAGTCCAAGCTATTGTGTTTCATGAATGTCTACATCGAAAAgGTcttaaactcgattcctggaggtgTATTCTCATGTAGGTTTGGCCGAAAGGCCTTGTTGATTTGGTCATATTTCCAGCTCGCACTCTTGGGCTCATTCACAGCTCTCGCTCCGTCTTATGTGGTCTACTGCATCTTCAGATTCCTGACAGGAATGTCAGTTTCTGGAGTCATTCTCAATGCTGTCTCCCTCAAGGTGGAGTGGATTCCCACTAAGACTCGGACTCTGGTGGGCACCTTATCATCTTTCTTCTTCACATTCGGTCAGATGGTTCTAGCTGGAGTGGCATACAGTCTAAGGGACTGGCGCAAAATACAAATGGCCGTCTGCCTTCCGTTTTTCATCTTCTTCATGTACAGCTGGTGGTTCTCTGAATCGGCCCGCTGGCTGGTGTTGAATGGTCGATCTGAAGAGGCGCTGAAGCTTCTCCACCGCGTAGCTAAAATTAACGGCAAGCCTGAGATGACAGAGAAGATCACTTTAGAGGAGCTGGAGTCCCACATGCAGAAAGAGGTTCAGTCCAGTAAGAGCATATACACTGTGTTTGACCTCCTGAGAACACCAACCATGAGGAAGATCTCCATGTGCCTTATGGTCGTCTGGTTTTCAACTAGCTTTGCATATTACGGTCTGGCTATGGACCTGCAGAAGTTCGGGGTGAACATCTATCTGATGCAGGTGATCTTCGGGGCGGTGGATTTTCCTGCTAAACTCGTGGCTCTTCTGATGCTGAGCTTTCTGGGCCGACGCTTGACTCAAGGCGCATGTCTCCTGGTGTCAGCATCTATAATATTTGCTAACATCTTTGTCCCTGAAGATATGCAGGTCACAAGGACAGCACTGGCCGTTCTTGGAAAGGGATTCACATCCGCCTCCTTCACCTGTGTCTACTTGTTTACTGGAGAGCTTTACCCTACTGTCATCAGGCAGACTGGTATGGGCTTTGTCTCTACCATGTCCAGAATAGGATCCATGGCTGCACCTGCTGTTCTGATCTTGGACGATATCCTGCCAGCTCTGCCTAGCATAGTATACGGAGGATCAGCTGTCATCGCTGGTTTAATAGCATTTTTGCTCCCTGAAACGCTCAACATCCCCCTGCCCGACACCATTGATGACGTGGAGGagaaatgGTATTTCAGAAAATTTGGCAGTACATCCAAACTGCCTCACAACCGCATACCATGTCTAACAACACCACCCAAGAACCTCCAAATTCAGCATCTT

Function

symbol description
oatx Enables organic anion transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Located in plasma membrane. Is expressed in several structures, including eye; heart; liver; skeletal muscle; and testis.

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function
GO:0008514 organic anion transmembrane transporter activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070115-1 Enables organic anion transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Located in plasma membrane. Is expressed in several structures, including eye; heart; liver; skeletal muscle; and testis.

Ensembl:

ensembl_id ENSDARG00000019713

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039092 True 1671 mRNA 0.48 12 44091342 44104600

Neighbor

gene id symbol gene type direction distance location
XLOC_019870 FO704810.1 coding downstream 9802 44041088 ~ 44081540 (-)
XLOC_019869 ndufa2 coding downstream 82173 44005521 ~ 44009169 (-)
XLOC_019868 arsib coding downstream 87885 43999699 ~ 44003457 (-)
XLOC_019867 cdx1b coding downstream 99315 43976075 ~ 43992027 (-)
XLOC_019866 camk2a coding downstream 138384 43897128 ~ 43952958 (-)
XLOC_019872 NA coding upstream 52473 44157073 ~ 44157770 (-)
XLOC_019873 zgc:136410 coding upstream 401013 44505613 ~ 44512893 (-)
XLOC_019874 brcc3 coding upstream 442850 44547450 ~ 44556411 (-)
XLOC_019875 fundc2 coding upstream 453191 44557791 ~ 44565862 (-)
XLOC_019876 CU855912.1 coding upstream 463580 44568180 ~ 44568266 (-)
XLOC_019864 NA non-coding downstream 391062 43684862 ~ 43700280 (-)
XLOC_019853 AL954767.1 non-coding downstream 698263 43390401 ~ 43393079 (-)
XLOC_019850 NA non-coding downstream 765450 43325281 ~ 43325892 (-)
XLOC_019849 NA non-coding downstream 839518 43246707 ~ 43251824 (-)
XLOC_019840 NA non-coding downstream 1935090 42150360 ~ 42156252 (-)
XLOC_019879 NA non-coding upstream 677668 44782268 ~ 44785206 (-)
XLOC_019881 NA non-coding upstream 1016762 45121362 ~ 45123821 (-)
XLOC_019882 NA non-coding upstream 1060214 45164814 ~ 45188233 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000040_00908325_00928762 OATX coding CI01000040 null 907887 ~ 928826 (+)