XLOC_019872


Basic Information

Item Value
gene id XLOC_019872
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 44157073 ~ 44157770 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039706
catATTCACAGGCTTTCTGTGGTAAGCTGGCCTTGTCAGCAAAACTGCCAGACTGTGACTTCACCCGTatgcgtgcctgtgtgtgtgtgtgtgtgtgtgtgcggctgtGCTGCTGAAGGTGTGATCCTGAGTGCACACATTTGAGCGTGTGGCGTCTCTGACACCGGGCCGGTTCTAATGAGGCGGTTCAGCAGGATCCGCACCCGAGCCGTGCCACCGAACATTGACAAATGGCTCTGCTCTCCTCATTTCATCTAAGTGAGCGAGGCCACAAGAGCTACCGGCAATTTCATAGAAACGAGTCCCCTGAGTCTGAACGTGACTTCGCTTTTGCCTGGTGATACCTGTGCTCCCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039706 True 355 lncRNA 0.55 2 44157073 44157770

Neighbor

gene id symbol gene type direction distance location
XLOC_019871 oatx coding downstream 52473 44091342 ~ 44104600 (-)
XLOC_019870 FO704810.1 coding downstream 75533 44041088 ~ 44081540 (-)
XLOC_019869 ndufa2 coding downstream 147904 44005521 ~ 44009169 (-)
XLOC_019868 arsib coding downstream 153616 43999699 ~ 44003457 (-)
XLOC_019867 cdx1b coding downstream 165046 43976075 ~ 43992027 (-)
XLOC_019873 zgc:136410 coding upstream 347843 44505613 ~ 44512893 (-)
XLOC_019874 brcc3 coding upstream 389680 44547450 ~ 44556411 (-)
XLOC_019875 fundc2 coding upstream 400021 44557791 ~ 44565862 (-)
XLOC_019876 CU855912.1 coding upstream 410410 44568180 ~ 44568266 (-)
XLOC_019877 ammecr1 coding upstream 551510 44709280 ~ 44731865 (-)
XLOC_019864 NA non-coding downstream 456793 43684862 ~ 43700280 (-)
XLOC_019853 AL954767.1 non-coding downstream 763994 43390401 ~ 43393079 (-)
XLOC_019850 NA non-coding downstream 831181 43325281 ~ 43325892 (-)
XLOC_019849 NA non-coding downstream 905249 43246707 ~ 43251824 (-)
XLOC_019840 NA non-coding downstream 2000821 42150360 ~ 42156252 (-)
XLOC_019879 NA non-coding upstream 624498 44782268 ~ 44785206 (-)
XLOC_019881 NA non-coding upstream 963592 45121362 ~ 45123821 (-)
XLOC_019882 NA non-coding upstream 1007044 45164814 ~ 45188233 (-)
XLOC_019887 NA non-coding upstream 1333457 45491227 ~ 45492856 (-)

Expression


Co-expression Network