Gene
RNA
| Item | Value |
|---|---|
| gene id | G2936 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 3818407 ~ 3818983 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106587709, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU3813 | True | 544 | lncRNA | 0.56 | 2 | 3818407 | 3818983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| amotl2a | LOC106591579 | coding | downstream | 52213 | 3752426 ~ 3766194 (-) |
| LOC118965007 | NA | coding | downstream | 97950 | 3708049 ~ 3720457 (-) |
| inpp5d | inpp5d | coding | downstream | 117922 | 3647837 ~ 3700485 (-) |
| smx5 | LSM2 | coding | downstream | 177458 | 3632307 ~ 3640949 (-) |
| LOC118964935 | NA | coding | downstream | 523833 | 3291184 ~ 3294574 (-) |
| cep63 | cep63 | coding | upstream | 6250 | 3825233 ~ 3847645 (-) |
| LOC110524898 | LOC107696768 | coding | upstream | 55855 | 3874838 ~ 4037960 (-) |
| LOC110524598 | LOC106574123 | coding | upstream | 221477 | 4040460 ~ 4121533 (-) |
| LOC110524778 | LOC106574121 | coding | upstream | 309423 | 4128406 ~ 4257029 (-) |
| LOC110524992 | sned1 | coding | upstream | 442534 | 4261517 ~ 4415138 (-) |
| G2934 | NA | non-coding | downstream | 7589 | 3810590 ~ 3810818 (-) |
| G2932 | NA | non-coding | downstream | 8457 | 3809726 ~ 3809950 (-) |
| G2921 | NA | non-coding | downstream | 37706 | 3780289 ~ 3780701 (-) |
| G2909 | NA | non-coding | downstream | 75205 | 3732306 ~ 3743202 (-) |
| G2889 | NA | non-coding | downstream | 126775 | 3690974 ~ 3691632 (-) |
| G3066 | NA | non-coding | upstream | 53718 | 3872701 ~ 3873135 (-) |
| G3064 | NA | non-coding | upstream | 54501 | 3873484 ~ 3874156 (-) |
| G3068 | NA | non-coding | upstream | 60872 | 3879855 ~ 3881517 (-) |
| G3070 | NA | non-coding | upstream | 61912 | 3880895 ~ 3882923 (-) |
| G3078 | NA | non-coding | upstream | 75097 | 3894080 ~ 3894468 (-) |
| G2772 | NA | other | downstream | 374308 | 3442338 ~ 3444099 (-) |
| G2749 | NA | other | downstream | 430192 | 3385306 ~ 3388215 (-) |
| G2730 | NA | other | downstream | 476539 | 3339713 ~ 3341868 (-) |
| G2605 | NA | other | downstream | 839491 | 2978615 ~ 2978916 (-) |
| G3152 | NA | other | upstream | 305293 | 4124276 ~ 4124695 (-) |
| G3291 | NA | other | upstream | 434204 | 4253187 ~ 4263613 (-) |
| LOC110486761 | kif1a | other | upstream | 932423 | 4751406 ~ 4921256 (-) |
| G3862 | NA | other | upstream | 1129700 | 4948683 ~ 4957072 (-) |
