Gene
RNA
| Item | Value |
|---|---|
| gene id | G3078 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 3894080 ~ 3894468 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU4006 | True | 211 | lncRNA | 0.54 | 3 | 3894080 | 3894468 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cep63 | cep63 | coding | downstream | 46435 | 3825233 ~ 3847645 (-) |
| amotl2a | LOC106591579 | coding | downstream | 127886 | 3752426 ~ 3766194 (-) |
| LOC118965007 | NA | coding | downstream | 173623 | 3708049 ~ 3720457 (-) |
| inpp5d | inpp5d | coding | downstream | 193595 | 3647837 ~ 3700485 (-) |
| smx5 | LSM2 | coding | downstream | 253131 | 3632307 ~ 3640949 (-) |
| LOC110524598 | LOC106574123 | coding | upstream | 145992 | 4040460 ~ 4121533 (-) |
| LOC110524778 | LOC106574121 | coding | upstream | 233938 | 4128406 ~ 4257029 (-) |
| LOC110524992 | sned1 | coding | upstream | 367049 | 4261517 ~ 4415138 (-) |
| crocc2 | LOC106574213 | coding | upstream | 546974 | 4441442 ~ 4685402 (-) |
| klhl30 | klhl30 | coding | upstream | 795757 | 4690225 ~ 4703383 (-) |
| G3070 | NA | non-coding | downstream | 11157 | 3880895 ~ 3882923 (-) |
| G3068 | NA | non-coding | downstream | 12563 | 3879855 ~ 3881517 (-) |
| G3064 | NA | non-coding | downstream | 19924 | 3873484 ~ 3874156 (-) |
| G3066 | NA | non-coding | downstream | 20945 | 3872701 ~ 3873135 (-) |
| G2936 | NA | non-coding | downstream | 75097 | 3818407 ~ 3818983 (-) |
| G3083 | NA | non-coding | upstream | 9459 | 3903927 ~ 3906698 (-) |
| G3106 | NA | non-coding | upstream | 66424 | 3960892 ~ 3961150 (-) |
| G3124 | NA | non-coding | upstream | 126184 | 4020652 ~ 4022709 (-) |
| G3148 | NA | non-coding | upstream | 221762 | 4116230 ~ 4116559 (-) |
| G3253 | NA | non-coding | upstream | 258151 | 4152619 ~ 4154560 (-) |
| G2772 | NA | other | downstream | 449981 | 3442338 ~ 3444099 (-) |
| G2749 | NA | other | downstream | 505865 | 3385306 ~ 3388215 (-) |
| G2730 | NA | other | downstream | 552212 | 3339713 ~ 3341868 (-) |
| G2605 | NA | other | downstream | 915164 | 2978615 ~ 2978916 (-) |
| G3152 | NA | other | upstream | 229808 | 4124276 ~ 4124695 (-) |
| G3291 | NA | other | upstream | 358719 | 4253187 ~ 4263613 (-) |
| LOC110486761 | kif1a | other | upstream | 856938 | 4751406 ~ 4921256 (-) |
| G3862 | NA | other | upstream | 1054215 | 4948683 ~ 4957072 (-) |
