Gene
RNA
| Item | Value |
|---|---|
| gene id | G3204 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 4279406 ~ 4279631 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sushi, nidogen and EGF-like domain-containing protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU4159 | True | 226 | lncRNA | 0.42 | 1 | 4279406 | 4279631 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| im:7152348 | LOC106573986 | coding | upstream | 426397 | 3848517 ~ 3853009 (+) |
| trnap-ugg | NA | coding | upstream | 431447 | 3847888 ~ 3847959 (+) |
| trnap-cgg | NA | coding | upstream | 431712 | 3847623 ~ 3847694 (+) |
| LOC118965227 | NA | coding | upstream | 453541 | 3822517 ~ 3826226 (+) |
| bcl6aa | LOC106574104 | coding | upstream | 654824 | 3602663 ~ 3624582 (+) |
| agxta | LOC105025628 | coding | downstream | 669096 | 4948727 ~ 4957086 (+) |
| LOC110526525 | LOC106613452 | coding | downstream | 1384540 | 5664171 ~ 5767693 (+) |
| LOC110527749 | armc9 | coding | downstream | 2279436 | 6559067 ~ 6651795 (+) |
| b3gnt7 | b3gnt7 | coding | downstream | 2404468 | 6684099 ~ 6700304 (+) |
| alpi.1 | LOC106574189 | coding | downstream | 2748919 | 7028550 ~ 7056518 (+) |
| G3202 | sned1 | non-coding | upstream | 1966 | 4277168 ~ 4277440 (+) |
| G3198 | NA | non-coding | upstream | 16332 | 4261515 ~ 4263074 (+) |
| G3183 | NA | non-coding | upstream | 68455 | 4201815 ~ 4210951 (+) |
| G3184 | NA | non-coding | upstream | 73396 | 4205456 ~ 4206010 (+) |
| G3178 | NA | non-coding | upstream | 91823 | 4187032 ~ 4187583 (+) |
| G3205 | NA | non-coding | downstream | 1776 | 4281407 ~ 4282416 (+) |
| G3211 | NA | non-coding | downstream | 10136 | 4289767 ~ 4290859 (+) |
| G3232 | NA | non-coding | downstream | 77808 | 4357439 ~ 4435484 (+) |
| G3354 | NA | non-coding | downstream | 165250 | 4444881 ~ 4453583 (+) |
| G3357 | NA | non-coding | downstream | 171229 | 4450860 ~ 4451777 (+) |
| G3176 | NA | other | upstream | 101333 | 4175323 ~ 4178073 (+) |
| G2464 | NA | other | upstream | 775825 | 3503269 ~ 3503581 (+) |
| G2343 | NA | other | upstream | 1063172 | 3214697 ~ 3216234 (+) |
| G2016 | NA | other | upstream | 1634237 | 2644335 ~ 2645169 (+) |
| G998 | LOC106576565 | other | upstream | 2015841 | 2258883 ~ 2305334 (+) |
| G3234 | NA | other | downstream | 119273 | 4398904 ~ 4399444 (+) |
| G3351 | NA | other | downstream | 160335 | 4439966 ~ 4441908 (+) |
| G3596 | NA | other | downstream | 574890 | 4854521 ~ 4856248 (+) |
| G3597 | NA | other | downstream | 576894 | 4856525 ~ 4857065 (+) |
| G5276 | NA | other | downstream | 2237851 | 6517482 ~ 6518189 (+) |
