G3416


Basic Information

Item Value
gene id G3416
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 4588656 ~ 4626800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU4418
ttccctatatagtgcactactttagaccagggccctattccctatatagtgcactactttagaccagagcccctattccctatatagtgcactactttagaccagaaccctattccctatatagtgcactactttagaccagagccctatggaaccctattccctatatagtgcactactttagaccagagccctatggaaccctattccctacatagtgcactactttagaccagagcccctattccctacatagtgcactactttagaccagaaccctattccctatatagtgcactactttagaccagaaccctattccctatatagtgcactactttagaccagagccctatggaaccctattccctacttagtgcactacGTTTTGGACCTATAtggatctggtcaacagtagggcactaaacagggaataggTGTCATTTATGATGAATAATGGCCATTTCAGAGTTGTATTAGAGGCCACAAAAGTACAAAAAGGCAAACAAACTCATTGTGCCCGTactctgcgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4418 True 535 lncRNA 0.43 3 4588656 4626800

Neighbor

gene id symbol gene type direction distance location
im:7152348 LOC106573986 coding upstream 735647 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 740697 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 740962 3847623 ~ 3847694 (+)
LOC118965227 NA coding upstream 762791 3822517 ~ 3826226 (+)
bcl6aa LOC106574104 coding upstream 964074 3602663 ~ 3624582 (+)
agxta LOC105025628 coding downstream 321927 4948727 ~ 4957086 (+)
LOC110526525 LOC106613452 coding downstream 1037371 5664171 ~ 5767693 (+)
LOC110527749 armc9 coding downstream 1932267 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 2057299 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 2401750 7028550 ~ 7056518 (+)
G3377 NA non-coding upstream 90465 4489992 ~ 4498191 (+)
G3375 NA non-coding upstream 98736 4482723 ~ 4489920 (+)
G3354 NA non-coding upstream 135073 4444881 ~ 4453583 (+)
G3357 NA non-coding upstream 136879 4450860 ~ 4451777 (+)
G3232 NA non-coding upstream 153172 4357439 ~ 4435484 (+)
G3521 klhl30 non-coding downstream 65448 4692248 ~ 4695358 (+)
G3522 NA non-coding downstream 68788 4695588 ~ 4700054 (+)
G3540 NA non-coding downstream 121558 4748358 ~ 4816025 (+)
G3544 NA non-coding downstream 135449 4762249 ~ 4762604 (+)
G3569 NA non-coding downstream 180221 4807021 ~ 4807264 (+)
G3351 NA other upstream 146748 4439966 ~ 4441908 (+)
G3234 NA other upstream 189212 4398904 ~ 4399444 (+)
G3176 NA other upstream 410583 4175323 ~ 4178073 (+)
G2464 NA other upstream 1085075 3503269 ~ 3503581 (+)
G2343 NA other upstream 1372422 3214697 ~ 3216234 (+)
G3596 NA other downstream 227721 4854521 ~ 4856248 (+)
G3597 NA other downstream 229725 4856525 ~ 4857065 (+)
G5276 NA other downstream 1890682 6517482 ~ 6518189 (+)
G5581 NA other downstream 2184194 6810994 ~ 6811621 (+)
G6434 NA other downstream 3098246 7725046 ~ 7725609 (+)

Expression


Co-expression Network