G3639


Basic Information

Item Value
gene id G3639
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 4942465 ~ 4943847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU4733
AGGTAACACAAGGCATCACAATGTAACACGGGGGGCATCACAATGTAACACGGGGGGCATCACAAGGTAACACAGGGGGCATCACAAGGTAACATAGGGGGCATCACAAGGTAACATGGGGGGCATCACAAGGTAACATAGGGGGCATCACAAGGTAACACGGAGGGCATCACAAGGTAACACAGGGGGCATCACAAGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4733 True 200 lncRNA 0.42 3 4942465 4943847

Neighbor

gene id symbol gene type direction distance location
im:7152348 LOC106573986 coding upstream 1089456 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 1094506 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 1094771 3847623 ~ 3847694 (+)
LOC118965227 NA coding upstream 1116600 3822517 ~ 3826226 (+)
bcl6aa LOC106574104 coding upstream 1317883 3602663 ~ 3624582 (+)
agxta LOC105025628 coding downstream 4880 4948727 ~ 4957086 (+)
LOC110526525 LOC106613452 coding downstream 720324 5664171 ~ 5767693 (+)
LOC110527749 armc9 coding downstream 1615220 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 1740252 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 2084703 7028550 ~ 7056518 (+)
G3617 NA non-coding upstream 31902 4909131 ~ 4910563 (+)
G3605 NA non-coding upstream 58110 4883994 ~ 4884355 (+)
G3601 LOC106573836 non-coding upstream 70523 4869971 ~ 4871942 (+)
G3580 NA non-coding upstream 114199 4827940 ~ 4828266 (+)
G3576 NA non-coding upstream 119307 4822066 ~ 4823158 (+)
G3695 NA non-coding downstream 140920 5084767 ~ 5085108 (+)
G3725 NA non-coding downstream 195282 5139129 ~ 5140516 (+)
G3964 NA non-coding downstream 241592 5185439 ~ 5185821 (+)
G3972 NA non-coding downstream 246583 5190430 ~ 5190635 (+)
G4025 NA non-coding downstream 300968 5244815 ~ 5245184 (+)
G3597 NA other upstream 85400 4856525 ~ 4857065 (+)
G3596 NA other upstream 86217 4854521 ~ 4856248 (+)
G3351 NA other upstream 500557 4439966 ~ 4441908 (+)
G3234 NA other upstream 543021 4398904 ~ 4399444 (+)
G3176 NA other upstream 764392 4175323 ~ 4178073 (+)
G5276 NA other downstream 1573635 6517482 ~ 6518189 (+)
G5581 NA other downstream 1867147 6810994 ~ 6811621 (+)
G6434 NA other downstream 2781199 7725046 ~ 7725609 (+)
G6518 NA other downstream 2941544 7885391 ~ 7885907 (+)
G6807 NA other downstream 3092770 8036617 ~ 8037154 (+)

Expression


Co-expression Network