G3725


Basic Information

Item Value
gene id G3725
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 5139129 ~ 5140516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU4834
CTTCTGtctcacctctcctgtctcacctTTTCTGcctcacctctcctgtctcacctctcctgtctcactTCTCCTGTCTCACCTTTTCTGtctcacctctcctgtctcacctctcctgtctcagtcctttttctattacagtatatcactgtctaGTCACAGAACCTTACTACAGGGAgtttacagtatatcactgtctaGTCACAGATCCTTACTACAGGGAgtttacagtatatcactgtctaGTCACAGATCCTTACTACTGGGAgtttacagtatatcactgtctaGTCACAGAACCTTACTACAGGGAgtttacagtatatcactgtctaGTCACAGAACCTTACTACAGGGAgtttacagtatatcactgtctaGTCACAGAGCCTTACTACAGGGAgtttacagtatatcactgtctaGTCACAGAGCCTTACTACAGGGAgtttacagtatatcactgtctaGTCACAGATCCTTACTACAGGGAgtttacagtatatcactgtctaGTCACAGAGCCTTACTACAGGGAgtttacagtatatcactgtctaGTCACAGAACCTTACTACAGGGAgtttacagtatatcactgtctaGTCACAGAGCCTTACTACAGGGAgtttacagtatatcactgtctaGTCACAGAGCCTTACTACAgggagactcacagctgtaatcactcttagagacttacccagaaagactcacagctcttagagacttacccagaaagactcacagctgtaatcactctgagagacttacccagaaagactcacagctgtaatcactcttagagatttacccagaaagacttacagctgtaatcactcttacagacttacccagaaagactcacagctgtaatcactcttagagacttacccagaaatcctcacagctgtaatcactcttagagacttacccagaaatactcacagctgtaatcactcttagagacttacccagaaagactcacagctgtaatgactcttagagacttacccagaaagattcacagctgtaatgtctcttagagacttacccagaaatcctcacagctgtaatcactcttagagacttacccagaaagactcacagctcttagagactcaccctgaaatactcacagctgtaatcgctcttagagacttacccagatagactcacagctgtaatcactcttagagatttacccagaaatactcacagctgcaatcactcttagagatttacccagaaagactcacagctgtaatcgctgccaaaggtgattctaatatgtattgactcagg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106604077 isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4834 True 1308 lncRNA 0.40 3 5139129 5140516

Neighbor

gene id symbol gene type direction distance location
agxta LOC105025628 coding upstream 182043 4948727 ~ 4957086 (+)
im:7152348 LOC106573986 coding upstream 1286120 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 1291170 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 1291435 3847623 ~ 3847694 (+)
LOC118965227 NA coding upstream 1313264 3822517 ~ 3826226 (+)
LOC110526525 LOC106613452 coding downstream 523655 5664171 ~ 5767693 (+)
LOC110527749 armc9 coding downstream 1418551 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 1543583 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 1888034 7028550 ~ 7056518 (+)
alpi.2 LOC106574193 coding downstream 1923852 7064368 ~ 7094220 (+)
G3695 NA non-coding upstream 54021 5084767 ~ 5085108 (+)
G3639 NA non-coding upstream 195282 4942465 ~ 4943847 (+)
G3617 NA non-coding upstream 228566 4909131 ~ 4910563 (+)
G3605 NA non-coding upstream 254774 4883994 ~ 4884355 (+)
G3601 LOC106573836 non-coding upstream 267187 4869971 ~ 4871942 (+)
G3964 NA non-coding downstream 44923 5185439 ~ 5185821 (+)
G3972 NA non-coding downstream 49914 5190430 ~ 5190635 (+)
G4025 NA non-coding downstream 104299 5244815 ~ 5245184 (+)
G4026 NA non-coding downstream 105389 5245905 ~ 5246152 (+)
G4032 NA non-coding downstream 112941 5253457 ~ 5253796 (+)
G3597 NA other upstream 282064 4856525 ~ 4857065 (+)
G3596 NA other upstream 282881 4854521 ~ 4856248 (+)
G3351 NA other upstream 697221 4439966 ~ 4441908 (+)
G3234 NA other upstream 739685 4398904 ~ 4399444 (+)
G3176 NA other upstream 961056 4175323 ~ 4178073 (+)
G5276 NA other downstream 1376966 6517482 ~ 6518189 (+)
G5581 NA other downstream 1670478 6810994 ~ 6811621 (+)
G6434 NA other downstream 2584530 7725046 ~ 7725609 (+)
G6518 NA other downstream 2744875 7885391 ~ 7885907 (+)
G6807 NA other downstream 2896101 8036617 ~ 8037154 (+)

Expression


Co-expression Network