G4032


Basic Information

Item Value
gene id G4032
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 5253457 ~ 5253796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU5250
gatcagtgattagttcattgactataattgcctttgaagtaagggatctaacattaagtagccctattttgagatgtgaggtatcaagatctctttcaataatgacaggaatggaggtggtctttatcctagtgagattgctaaggcgaacaccgccatgtttagttttgcccaacctaggtcgaggcacagacacggtctcaatggggatagctgagctgactacactgactgtgctagtggcagactccactatgctggcaggctggctaacagcctgctgcctggcctgcaccctatttcattgtggagctagaggagttagagccctgtctatgtt

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5250 True 340 lncRNA 0.34 1 5253457 5253796

Neighbor

gene id symbol gene type direction distance location
agxta LOC105025628 coding upstream 296371 4948727 ~ 4957086 (+)
im:7152348 LOC106573986 coding upstream 1400448 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 1405498 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 1405763 3847623 ~ 3847694 (+)
LOC118965227 NA coding upstream 1427592 3822517 ~ 3826226 (+)
LOC110526525 LOC106613452 coding downstream 410375 5664171 ~ 5767693 (+)
LOC110527749 armc9 coding downstream 1305271 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 1430303 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 1774754 7028550 ~ 7056518 (+)
alpi.2 LOC106574193 coding downstream 1810572 7064368 ~ 7094220 (+)
G4026 NA non-coding upstream 7305 5245905 ~ 5246152 (+)
G4025 NA non-coding upstream 8273 5244815 ~ 5245184 (+)
G3972 NA non-coding upstream 62822 5190430 ~ 5190635 (+)
G3964 NA non-coding upstream 67636 5185439 ~ 5185821 (+)
G3725 NA non-coding upstream 112941 5139129 ~ 5140516 (+)
G4033 NA non-coding downstream 132 5253928 ~ 5254214 (+)
G4039 NA non-coding downstream 9738 5263534 ~ 5263885 (+)
G4057 NA non-coding downstream 38571 5292367 ~ 5292590 (+)
G4062 NA non-coding downstream 47050 5300846 ~ 5301088 (+)
G4065 NA non-coding downstream 56759 5310555 ~ 5310794 (+)
G3597 NA other upstream 396392 4856525 ~ 4857065 (+)
G3596 NA other upstream 397209 4854521 ~ 4856248 (+)
G3351 NA other upstream 811549 4439966 ~ 4441908 (+)
G3234 NA other upstream 854013 4398904 ~ 4399444 (+)
G3176 NA other upstream 1075384 4175323 ~ 4178073 (+)
G5276 NA other downstream 1263686 6517482 ~ 6518189 (+)
G5581 NA other downstream 1557198 6810994 ~ 6811621 (+)
G6434 NA other downstream 2471250 7725046 ~ 7725609 (+)
G6518 NA other downstream 2631595 7885391 ~ 7885907 (+)
G6807 NA other downstream 2782821 8036617 ~ 8037154 (+)

Expression


Co-expression Network