Item | Value |
---|---|
gene id | G4129 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048565.1 |
NCBI id | CM023219.2 |
chromosome length | 95772356 |
location | 5350470 ~ 5351002 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU5352 | False | 323 | lncRNA | 0.40 | 3 | 5350470 | 5351002 |
TU5357 | True | 360 | lncRNA | 0.45 | 2 | 5350470 | 5351002 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
agxta | LOC105025628 | coding | upstream | 393384 | 4948727 ~ 4957086 (+) |
im:7152348 | LOC106573986 | coding | upstream | 1497461 | 3848517 ~ 3853009 (+) |
trnap-ugg | NA | coding | upstream | 1502511 | 3847888 ~ 3847959 (+) |
trnap-cgg | NA | coding | upstream | 1502776 | 3847623 ~ 3847694 (+) |
LOC118965227 | NA | coding | upstream | 1524605 | 3822517 ~ 3826226 (+) |
LOC110526525 | LOC106613452 | coding | downstream | 313169 | 5664171 ~ 5767693 (+) |
LOC110527749 | armc9 | coding | downstream | 1208065 | 6559067 ~ 6651795 (+) |
b3gnt7 | b3gnt7 | coding | downstream | 1333097 | 6684099 ~ 6700304 (+) |
alpi.1 | LOC106574189 | coding | downstream | 1677548 | 7028550 ~ 7056518 (+) |
alpi.2 | LOC106574193 | coding | downstream | 1713366 | 7064368 ~ 7094220 (+) |
G4119 | NA | non-coding | upstream | 20841 | 5329270 ~ 5329629 (+) |
G4066 | NA | non-coding | upstream | 36712 | 5313531 ~ 5313758 (+) |
G4065 | NA | non-coding | upstream | 39676 | 5310555 ~ 5310794 (+) |
G4062 | NA | non-coding | upstream | 49382 | 5300846 ~ 5301088 (+) |
G4057 | NA | non-coding | upstream | 57880 | 5292367 ~ 5292590 (+) |
G4139 | NA | non-coding | downstream | 8978 | 5359980 ~ 5360236 (+) |
G4142 | NA | non-coding | downstream | 12412 | 5363414 ~ 5363772 (+) |
G4150 | NA | non-coding | downstream | 23881 | 5374883 ~ 5375125 (+) |
G4163 | NA | non-coding | downstream | 40819 | 5391821 ~ 5392089 (+) |
G4190 | NA | non-coding | downstream | 63455 | 5414457 ~ 5414731 (+) |
G3597 | NA | other | upstream | 493405 | 4856525 ~ 4857065 (+) |
G3596 | NA | other | upstream | 494222 | 4854521 ~ 4856248 (+) |
G3351 | NA | other | upstream | 908562 | 4439966 ~ 4441908 (+) |
G3234 | NA | other | upstream | 951026 | 4398904 ~ 4399444 (+) |
G3176 | NA | other | upstream | 1172397 | 4175323 ~ 4178073 (+) |
G5276 | NA | other | downstream | 1166480 | 6517482 ~ 6518189 (+) |
G5581 | NA | other | downstream | 1459992 | 6810994 ~ 6811621 (+) |
G6434 | NA | other | downstream | 2374044 | 7725046 ~ 7725609 (+) |
G6518 | NA | other | downstream | 2534389 | 7885391 ~ 7885907 (+) |
G6807 | NA | other | downstream | 2685615 | 8036617 ~ 8037154 (+) |