XLOC_019887



Basic Information


Item Value
gene id XLOC_019887
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 45491227 ~ 45492856 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00039710
GAATCATCAGGAACAGACGTCTTGGAACTCAAAGGGTCCTTAGTGGTGACGGGACCATTCGGTGCATTTGTGCTTGATTGATCAGAAGCAGTTGTTGTGGTTAATAAACTAGGAAGAACTATGTTGCTTGATTGGTCAGGAGAAACAGTGGTGCTTGACTGACCTTCAGGAACTGCAGCAGTTGTGGATTCAACAGAAACATATGTATTTAAATCCAAAGGTTCTTTAGTGGTGACTGAATTGTTATTAGCAGTTGTGCTTGACAGATCATCAGGAACTCCACTGATTGATTGGCCTGGAGAAAGAGTTGTGCTTGACTGACCTGCAGGAACTGGAGCAGTTGTAGAATCATTAAGAGATGATGTCTTGGAACTCAAAGGGTCCTTAGTGGTGATGCCACCATTCGGTGCATTTGTGCTTGATTGATCAGAAGCAGCTGTTGTGATTAATAGACTAGGAAGAACTACATTGCTTGATTGGTCTAGAGGAACAGTTGTGCTTGACTGACCTACAGGAACTGCAGCAGTTGTGGAATCAACAGAAACATATGTCTTTGATTCCAAAGGTTCTTTAGTGGTGATTGGTCTATTATTAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00039710 True 595 lncRNA 0.42 2 45491227 45492856

Neighbor


gene id symbol gene type direction distance location
XLOC_019886 cdkn2aipnl coding downstream 109032 45377211 ~ 45382195 (-)
XLOC_019885 PPP2CA coding downstream 127271 45351660 ~ 45363956 (-)
XLOC_019884 skp1 coding downstream 141679 45341786 ~ 45349548 (-)
XLOC_019883 vdac1 coding downstream 281135 45190582 ~ 45210092 (-)
XLOC_019882 NA coding downstream 302994 45164814 ~ 45188233 (-)
XLOC_019888 LO018363.2 coding upstream 89129 45581985 ~ 45588720 (-)
XLOC_019889 LO018363.1 coding upstream 97535 45590391 ~ 45658641 (-)
XLOC_019890 sar1b coding upstream 180577 45673433 ~ 45685063 (-)
XLOC_019891 NA coding upstream 195079 45687935 ~ 45709745 (-)
XLOC_019892 CU302316.1 coding upstream 200257 45693113 ~ 45728069 (-)
XLOC_019881 NA non-coding downstream 367406 45121362 ~ 45123821 (-)
XLOC_019879 NA non-coding downstream 706021 44782268 ~ 44785206 (-)
XLOC_019876 CU855912.1 non-coding downstream 922961 44568180 ~ 44568266 (-)
XLOC_019872 NA non-coding downstream 1333457 44157073 ~ 44157770 (-)
XLOC_019893 NA non-coding upstream 338185 45831041 ~ 45837230 (-)

Expression



Co-expression Network