G4454


Basic Information

Item Value
gene id G4454
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 5755740 ~ 5756202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU5777
CAGATACCTCAATCTGGTGCTAGTAGGGTTGCACAACTCCCCAAATCCACAGGTTTTCCCAGGATATCTAGAACCTTGGAATATTCCATCCAGGATATCTAGAACCTTGGAATATTCCATCCAAGATAACTAGAACCTTGGAATATTCCATCCAGGATATCTAGAACCTTGGAAtattccaatcaaatcaaatcaaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccgggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5777 True 401 lncRNA 0.44 2 5755740 5756202

Neighbor

gene id symbol gene type direction distance location
agxta LOC105025628 coding upstream 798654 4948727 ~ 4957086 (+)
im:7152348 LOC106573986 coding upstream 1902731 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 1907781 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 1908046 3847623 ~ 3847694 (+)
LOC118965227 NA coding upstream 1929875 3822517 ~ 3826226 (+)
LOC110527749 armc9 coding downstream 802865 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 927897 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 1272348 7028550 ~ 7056518 (+)
alpi.2 LOC106574193 coding downstream 1308166 7064368 ~ 7094220 (+)
ankle1 LOC106574192 coding downstream 1340097 7096299 ~ 7107509 (+)
G4436 NA non-coding upstream 41716 5713222 ~ 5714024 (+)
G4395 NA non-coding upstream 97660 5657440 ~ 5658080 (+)
G4378 NA non-coding upstream 118999 5635334 ~ 5636741 (+)
G4373 NA non-coding upstream 125487 5629938 ~ 5630253 (+)
G4330 NA non-coding upstream 175956 5579364 ~ 5579784 (+)
G4459 NA non-coding downstream 18093 5774295 ~ 5774817 (+)
G4484 NA non-coding downstream 55748 5811950 ~ 5812165 (+)
G4485 NA non-coding downstream 58701 5814903 ~ 5815131 (+)
G4596 NA non-coding downstream 110155 5866357 ~ 5866573 (+)
G4612 NA non-coding downstream 132160 5888362 ~ 5888781 (+)
G3597 NA other upstream 898675 4856525 ~ 4857065 (+)
G3596 NA other upstream 899492 4854521 ~ 4856248 (+)
G3351 NA other upstream 1313832 4439966 ~ 4441908 (+)
G3234 NA other upstream 1356296 4398904 ~ 4399444 (+)
G3176 NA other upstream 1577667 4175323 ~ 4178073 (+)
G5276 NA other downstream 761280 6517482 ~ 6518189 (+)
G5581 NA other downstream 1054792 6810994 ~ 6811621 (+)
G6434 NA other downstream 1968844 7725046 ~ 7725609 (+)
G6518 NA other downstream 2129189 7885391 ~ 7885907 (+)
G6807 NA other downstream 2280415 8036617 ~ 8037154 (+)

Expression


Co-expression Network