G4459


Basic Information

Item Value
gene id G4459
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 5774295 ~ 5774817 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU5782
cgtatTTTCGTTTCAGACAGGTCTAAGCTACATTATTCTCTCTCCTTGAAAAAACAGGCCGAGGACATTAATGTCCAACTGCAGTCTGTTAAATCTGCCGTAGTACTATCGTTCATCTGTCTACTGGATATTGATTCACAGAGTTCATTCACTTTAATGGTCCTTCTGCTACTGACTAGTATTAGCGCGAGGTACAAAATAAAATATAAGGTGCCCATATTAGGACGGCCTCTGTTATAGCAGGACCTTTAATCTCGGCaggactttttattttatttatttcacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggctagttgagaacaagttctcatttataactgcgacctggccaagataaagcaaagcagttcgacacatacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5782 True 457 lncRNA 0.37 3 5774295 5774817

Neighbor

gene id symbol gene type direction distance location
LOC110526525 LOC106613452 coding upstream 6602 5664171 ~ 5767693 (+)
agxta LOC105025628 coding upstream 817209 4948727 ~ 4957086 (+)
im:7152348 LOC106573986 coding upstream 1921286 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 1926336 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 1926601 3847623 ~ 3847694 (+)
LOC110527749 armc9 coding downstream 784250 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 909282 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 1253733 7028550 ~ 7056518 (+)
alpi.2 LOC106574193 coding downstream 1289551 7064368 ~ 7094220 (+)
ankle1 LOC106574192 coding downstream 1321482 7096299 ~ 7107509 (+)
G4454 NA non-coding upstream 18093 5755740 ~ 5756202 (+)
G4436 NA non-coding upstream 60271 5713222 ~ 5714024 (+)
G4395 NA non-coding upstream 116215 5657440 ~ 5658080 (+)
G4378 NA non-coding upstream 137554 5635334 ~ 5636741 (+)
G4373 NA non-coding upstream 144042 5629938 ~ 5630253 (+)
G4484 NA non-coding downstream 37133 5811950 ~ 5812165 (+)
G4485 NA non-coding downstream 40086 5814903 ~ 5815131 (+)
G4596 NA non-coding downstream 91540 5866357 ~ 5866573 (+)
G4612 NA non-coding downstream 113545 5888362 ~ 5888781 (+)
G4620 NA non-coding downstream 119227 5894044 ~ 5894264 (+)
G3597 NA other upstream 917230 4856525 ~ 4857065 (+)
G3596 NA other upstream 918047 4854521 ~ 4856248 (+)
G3351 NA other upstream 1332387 4439966 ~ 4441908 (+)
G3234 NA other upstream 1374851 4398904 ~ 4399444 (+)
G3176 NA other upstream 1596222 4175323 ~ 4178073 (+)
G5276 NA other downstream 742665 6517482 ~ 6518189 (+)
G5581 NA other downstream 1036177 6810994 ~ 6811621 (+)
G6434 NA other downstream 1950229 7725046 ~ 7725609 (+)
G6518 NA other downstream 2110574 7885391 ~ 7885907 (+)
G6807 NA other downstream 2261800 8036617 ~ 8037154 (+)

Expression


Co-expression Network