Gene
RNA
| Item | Value |
|---|---|
| gene id | G5049 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 6301283 ~ 6301808 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| intestinal-type alkaline phosphatase-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU6411 | True | 274 | lncRNA | 0.50 | 3 | 6301283 | 6301808 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526525 | LOC106613452 | coding | upstream | 533590 | 5664171 ~ 5767693 (+) |
| agxta | LOC105025628 | coding | upstream | 1344197 | 4948727 ~ 4957086 (+) |
| im:7152348 | LOC106573986 | coding | upstream | 2448274 | 3848517 ~ 3853009 (+) |
| trnap-ugg | NA | coding | upstream | 2453324 | 3847888 ~ 3847959 (+) |
| trnap-cgg | NA | coding | upstream | 2453589 | 3847623 ~ 3847694 (+) |
| LOC110527749 | armc9 | coding | downstream | 257259 | 6559067 ~ 6651795 (+) |
| b3gnt7 | b3gnt7 | coding | downstream | 382291 | 6684099 ~ 6700304 (+) |
| alpi.1 | LOC106574189 | coding | downstream | 726742 | 7028550 ~ 7056518 (+) |
| alpi.2 | LOC106574193 | coding | downstream | 762560 | 7064368 ~ 7094220 (+) |
| ankle1 | LOC106574192 | coding | downstream | 794491 | 7096299 ~ 7107509 (+) |
| G4928 | NA | non-coding | upstream | 113509 | 6182768 ~ 6187774 (+) |
| G4836 | NA | non-coding | upstream | 228776 | 6072297 ~ 6072507 (+) |
| G4620 | NA | non-coding | upstream | 407019 | 5894044 ~ 5894264 (+) |
| G4612 | NA | non-coding | upstream | 412502 | 5888362 ~ 5888781 (+) |
| G4596 | NA | non-coding | upstream | 434710 | 5866357 ~ 5866573 (+) |
| G5125 | NA | non-coding | downstream | 53813 | 6355621 ~ 6356004 (+) |
| G5146 | NA | non-coding | downstream | 68092 | 6369900 ~ 6370385 (+) |
| G5149 | NA | non-coding | downstream | 69492 | 6371300 ~ 6371709 (+) |
| G5169 | NA | non-coding | downstream | 104077 | 6405885 ~ 6406131 (+) |
| G5180 | NA | non-coding | downstream | 119100 | 6420908 ~ 6421250 (+) |
| G3597 | NA | other | upstream | 1444218 | 4856525 ~ 4857065 (+) |
| G3596 | NA | other | upstream | 1445035 | 4854521 ~ 4856248 (+) |
| G3351 | NA | other | upstream | 1859375 | 4439966 ~ 4441908 (+) |
| G3234 | NA | other | upstream | 1901839 | 4398904 ~ 4399444 (+) |
| G3176 | NA | other | upstream | 2123210 | 4175323 ~ 4178073 (+) |
| G5276 | NA | other | downstream | 215674 | 6517482 ~ 6518189 (+) |
| G5581 | NA | other | downstream | 509186 | 6810994 ~ 6811621 (+) |
| G6434 | NA | other | downstream | 1423238 | 7725046 ~ 7725609 (+) |
| G6518 | NA | other | downstream | 1583583 | 7885391 ~ 7885907 (+) |
| G6807 | NA | other | downstream | 1734809 | 8036617 ~ 8037154 (+) |
