G5183


Basic Information

Item Value
gene id G5183
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 6422324 ~ 6422546 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU6548
tagtgcactactttcgaccagggcccattgtcaaatgtagtgcactactttcgaccagggcccattgtcaaatgtagtgcactactttcgaccagggcccatagtcaaatgtagtgcactactttcgaccagggcccatagtcaaatgtagtgcactactttcgtcCAGGGCCCattgtcaaatgtagtgcactactttcgaccagggcccatagtcaaatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6548 True 223 lncRNA 0.42 1 6422324 6422546

Neighbor

gene id symbol gene type direction distance location
LOC110526525 LOC106613452 coding upstream 654631 5664171 ~ 5767693 (+)
agxta LOC105025628 coding upstream 1465238 4948727 ~ 4957086 (+)
im:7152348 LOC106573986 coding upstream 2569315 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 2574365 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 2574630 3847623 ~ 3847694 (+)
LOC110527749 armc9 coding downstream 136521 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 261553 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 606004 7028550 ~ 7056518 (+)
alpi.2 LOC106574193 coding downstream 641822 7064368 ~ 7094220 (+)
ankle1 LOC106574192 coding downstream 673753 7096299 ~ 7107509 (+)
G5180 NA non-coding upstream 1074 6420908 ~ 6421250 (+)
G5169 NA non-coding upstream 16193 6405885 ~ 6406131 (+)
G5149 NA non-coding upstream 50615 6371300 ~ 6371709 (+)
G5146 NA non-coding upstream 51939 6369900 ~ 6370385 (+)
G5125 NA non-coding upstream 66320 6355621 ~ 6356004 (+)
G5203 NA non-coding downstream 11545 6434091 ~ 6434294 (+)
G5204 NA non-coding downstream 14405 6436951 ~ 6438837 (+)
G5207 NA non-coding downstream 20359 6442905 ~ 6443190 (+)
G5209 NA non-coding downstream 21659 6444205 ~ 6444520 (+)
G5212 NA non-coding downstream 25935 6448481 ~ 6448733 (+)
G3597 NA other upstream 1565259 4856525 ~ 4857065 (+)
G3596 NA other upstream 1566076 4854521 ~ 4856248 (+)
G3351 NA other upstream 1980416 4439966 ~ 4441908 (+)
G3234 NA other upstream 2022880 4398904 ~ 4399444 (+)
G3176 NA other upstream 2244251 4175323 ~ 4178073 (+)
G5276 NA other downstream 94936 6517482 ~ 6518189 (+)
G5581 NA other downstream 388448 6810994 ~ 6811621 (+)
G6434 NA other downstream 1302500 7725046 ~ 7725609 (+)
G6518 NA other downstream 1462845 7885391 ~ 7885907 (+)
G6807 NA other downstream 1614071 8036617 ~ 8037154 (+)

Expression


Co-expression Network