G5276


Basic Information

Item Value
gene id G5276
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 6517482 ~ 6518189 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU6645
ggcagactcagtagcctcggtttttcggatgactgccttgcctggttcaccaattactttgcagacagagttcagtgtgtcaaatcggagggcatgctgtccggtcctctggcagtctctatgggggtgccacagggttcaattctcgggccgactcttttctctgtatatatcaatgatgtttctcatgctgcgggcgattccctgatccacctctacgcagacgacaccattctatatacttccggcccgtccttggacactgtgctatctaacctccaaacgagcttcaatgccatacagcactccttccgtggcctccaactgctcttaaacgctagtaaaaccaaatgcatgcttttcaaccgttcgctgcctgcacctgcacgcctgaccagcatcaccaccctggatggttccgaccttgaatatgtggacatctataagtacctaggtgtctggctagactctaaactctccttccagacccatatcaaacatctccaatcgaaaatcaaatcaagagtcggctttctattccgcaacaaagcctccttcactcacgccgccaaacttaccctagtaaaactgactatcctaccgatcctcgacttcggcgacgtcatctacaaaattgcttccaacactctactcagcaaactggatgcagtttatcacagtgccatccgttttgtcactaaagcacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6645 True 708 TUCP 0.49 1 6517482 6518189

Neighbor

gene id symbol gene type direction distance location
LOC110526525 LOC106613452 coding upstream 749789 5664171 ~ 5767693 (+)
agxta LOC105025628 coding upstream 1560396 4948727 ~ 4957086 (+)
im:7152348 LOC106573986 coding upstream 2664473 3848517 ~ 3853009 (+)
trnap-ugg NA coding upstream 2669523 3847888 ~ 3847959 (+)
trnap-cgg NA coding upstream 2669788 3847623 ~ 3847694 (+)
LOC110527749 armc9 coding downstream 40878 6559067 ~ 6651795 (+)
b3gnt7 b3gnt7 coding downstream 165910 6684099 ~ 6700304 (+)
alpi.1 LOC106574189 coding downstream 510361 7028550 ~ 7056518 (+)
alpi.2 LOC106574193 coding downstream 546179 7064368 ~ 7094220 (+)
ankle1 LOC106574192 coding downstream 578110 7096299 ~ 7107509 (+)
G5273 NA non-coding upstream 1739 6515106 ~ 6515743 (+)
G5266 NA non-coding upstream 7355 6509927 ~ 6510127 (+)
G5264 NA non-coding upstream 11294 6505988 ~ 6506188 (+)
G5255 NA non-coding upstream 18761 6498421 ~ 6498721 (+)
G5253 NA non-coding upstream 21104 6495793 ~ 6496378 (+)
G5304 NA non-coding downstream 60415 6578604 ~ 6579773 (+)
G5324 NA non-coding downstream 105615 6623804 ~ 6629779 (+)
G5365 ncl non-coding downstream 224282 6742471 ~ 6747632 (+)
G5366 NA non-coding downstream 230138 6748327 ~ 6748866 (+)
G3597 NA other upstream 1660417 4856525 ~ 4857065 (+)
G3596 NA other upstream 1661234 4854521 ~ 4856248 (+)
G3351 NA other upstream 2075574 4439966 ~ 4441908 (+)
G3234 NA other upstream 2118038 4398904 ~ 4399444 (+)
G3176 NA other upstream 2339409 4175323 ~ 4178073 (+)
G5581 NA other downstream 292805 6810994 ~ 6811621 (+)
G6434 NA other downstream 1206857 7725046 ~ 7725609 (+)
G6518 NA other downstream 1367202 7885391 ~ 7885907 (+)
G6807 NA other downstream 1518428 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 1711108 8229189 ~ 8231566 (+)

Expression


Co-expression Network