G5581


Basic Information

Item Value
gene id G5581
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 6810994 ~ 6811621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU6993
agagggaaacgaagcggtcttctggtcaggctccggagacgggcacatcgcgcaccactccctagcatacttctcgccaatgtccagtctcttgacaacaaggttgatgaaatccgagcaagggtagcattccagagggacatcagagactgtaacgttctttgcttcacggaaacatggctcactcgagagacgctaacgggatcggtgcagccagctggtttcttcacgcatcgcgcggacagaaacaaacatctttctggtaagaagaggggcgggggcgtatgccttatggttaacgagacgtggtgtggtcacaacaacatacaggaactcaagtccttctgttcacctgatttagaattcctcacaatcaaatgtcgaccgcattatctaccaagggaattctctttgattataatcacagccgtatatattcccccccaagcagacacatcgatggctctgaacaaactttatttgactctttgcaaactggaaaccacatatcctgaggctgcattcattgaagctggggattttaacaaggctaatctgaaaacaagactccctaaattgtatcagcatatcgattgcgcaaccagggctggtaaaccttggatcattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6993 True 628 TUCP 0.34 1 6810994 6811621

Neighbor

gene id symbol gene type direction distance location
b3gnt7 b3gnt7 coding upstream 110690 6684099 ~ 6700304 (+)
LOC110527749 armc9 coding upstream 159199 6559067 ~ 6651795 (+)
LOC110526525 LOC106613452 coding upstream 1043301 5664171 ~ 5767693 (+)
agxta LOC105025628 coding upstream 1853908 4948727 ~ 4957086 (+)
im:7152348 LOC106573986 coding upstream 2957985 3848517 ~ 3853009 (+)
alpi.1 LOC106574189 coding downstream 216929 7028550 ~ 7056518 (+)
alpi.2 LOC106574193 coding downstream 252747 7064368 ~ 7094220 (+)
ankle1 LOC106574192 coding downstream 284678 7096299 ~ 7107509 (+)
LOC118966183 NA coding downstream 518831 7330452 ~ 7331042 (+)
LOC110528450 LOC106574163 coding downstream 602992 7414613 ~ 7550394 (+)
G5580 NA non-coding upstream 720 6810044 ~ 6810274 (+)
G5567 NA non-coding upstream 1717 6792756 ~ 6809277 (+)
G5366 NA non-coding upstream 62128 6748327 ~ 6748866 (+)
G5365 ncl non-coding upstream 63362 6742471 ~ 6747632 (+)
G5583 NA non-coding downstream 887 6812508 ~ 6812775 (+)
G5669 NA non-coding downstream 74641 6886262 ~ 6886485 (+)
G5705 NA non-coding downstream 104831 6916452 ~ 6916713 (+)
G5712 NA non-coding downstream 110652 6922273 ~ 6922647 (+)
G5713 NA non-coding downstream 112130 6923751 ~ 6923995 (+)
G5276 NA other upstream 292805 6517482 ~ 6518189 (+)
G3597 NA other upstream 1953929 4856525 ~ 4857065 (+)
G3596 NA other upstream 1954746 4854521 ~ 4856248 (+)
G3351 NA other upstream 2369086 4439966 ~ 4441908 (+)
G3234 NA other upstream 2411550 4398904 ~ 4399444 (+)
G6434 NA other downstream 913425 7725046 ~ 7725609 (+)
G6518 NA other downstream 1073770 7885391 ~ 7885907 (+)
G6807 NA other downstream 1224996 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 1417676 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 1443521 8255142 ~ 8271732 (+)

Expression


Co-expression Network