G5775



Basic Information


Item Value
gene id G5775
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 6966767 ~ 6966988 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU7194
atatggggcggcagggtagcctagtggttagagcgttggactagtaaccggaaggttgtgagttcaaacccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttcccaggccgtcattgaaaataagaatttgttcttaactgacttgcctggttaaataaaggtaaaataaaaaaataaaaaaaataaaaaaaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU7194 True 222 lncRNA 0.35 1 6966767 6966988

Neighbor


gene id symbol gene type direction distance location
LOC110528129 nppc coding downstream 186888 6774389 ~ 6779879 (-)
LOC110528054 NA coding downstream 206219 6757914 ~ 6760548 (-)
LOC118966762 NA coding downstream 218636 6748011 ~ 6748131 (-)
LOC118966755 NA coding downstream 219057 6747638 ~ 6747710 (-)
LOC118966756 NA coding downstream 219912 6746783 ~ 6746855 (-)
LOC110531419 LOC106574164 coding upstream 737823 7704811 ~ 7727531 (-)
ddx59 ddx59 coding upstream 762605 7729593 ~ 7739189 (-)
dynlt2b tctex1d2 coding upstream 1173180 8140168 ~ 8147503 (-)
LOC118965595 NA coding upstream 1210293 8177281 ~ 8182131 (-)
LOC110529671 rubcn coding upstream 1307650 8274638 ~ 8341087 (-)
G5681 NA non-coding downstream 72323 6891270 ~ 6894444 (-)
G5642 NA non-coding downstream 107688 6858808 ~ 6859079 (-)
G5599 NA non-coding downstream 136107 6830431 ~ 6830660 (-)
G5582 NA non-coding downstream 155286 6811081 ~ 6811481 (-)
G5532 NA non-coding downstream 233019 6732803 ~ 6733748 (-)
G5787 NA non-coding upstream 9233 6976221 ~ 6976664 (-)
G6074 NA non-coding upstream 16936 6983924 ~ 7033530 (-)
G6083 NA non-coding upstream 27842 6994830 ~ 6995099 (-)
G6085 NA non-coding upstream 45247 7012235 ~ 7012970 (-)
G6099 NA non-coding upstream 65708 7032696 ~ 7085372 (-)
G5487 NA other downstream 216731 6740509 ~ 6750036 (-)
mfsd8l1 LOC106574194 other downstream 415421 6537498 ~ 6551510 (-)
G4804 NA other downstream 948691 6016822 ~ 6018076 (-)
G3862 NA other downstream 2009695 4948683 ~ 4957072 (-)
LOC110486761 kif1a other downstream 2199628 4751406 ~ 4921256 (-)
G6347 NA other upstream 547123 7514111 ~ 7517821 (-)
G6706 NA other upstream 917355 7884343 ~ 7885000 (-)
G6810 LOC107579696 other upstream 1072191 8039179 ~ 8039463 (-)
G7184 LOC100135997 other upstream 1197288 8164276 ~ 8183933 (-)

Expression



Co-expression Network