G5815


Basic Information

Item Value
gene id G5815
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7012089 ~ 7013653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU7234
gtcaaatgtttggacacacctactcattccaatgttttctgtatttttatttcaaaactatgaaataacacatgtggaatcatgtagtaatcaaaaaagtgttaaacaaatcaaaatatattttataatttagattcttcaaagtaacgaccctttgccttgatgacagctttacacactcctGCCATTCTCTTATCCAGCTTCATGAagtgttgaaggagttcccacatatgctgagcacttgttgcctgcttttccttcactctgcggccctactcattccaaaccatctcaattagtttGAGGTCAGGGTGTTGTGGAGGTCAAGTCATCTGAAGTGTattgaacaagtgacatcaatgagggatcatagctttcacctggattcacctgggcagtctatgtcatgggaaagagcaggtgttcctcatGTCTTGCACAGTCAGTGTATTACCTACACTGTGACTTGTAGACTAAGCTACTGTTATACCCAGATGTTCTCAGAAGAAGCAGACCATTGTTGACGAACTCATGTTTTCCCACAAAGATGCCACTGTTAAATATAATTagtctggtaaaaaaaaaataataataataataatttaaacttGTCTTATTGCACGGTGTAGAAATGCCAGCTGAAAGCTTGGTCTACTCTAAAATCTACACTGGTAGCTAATGGCATTGAAATACTGTACCTTTTAGTTGCCTATGGTGATCCGATACTATACACAAATCGAGAGTGAAACTTTGCCAAAAATATCCTCCCATACGTAGCTTTTGTAAATAATACCTAGTTATGCAGTAGAGGTCACCTCTGGtttttctctgttttcttttgGCCTTGTCTTGGGAACGCTTCTGTGTGGCTTTTCAATGGTCATTTCCATTAGTAGGcctacatacatatatatatatatatatatatctcCATTTATTAATTTAGACAGGCCACAACCGAGAAAGGACTCTTGCATTTACAGTATGTTCGTCATTGACCATGTTCGCCATCTGCAGCCCACGGTGACGGTGTCCTGTGTCACTTCCAGTGAAAAACCAATGCAGAAAACTGACTCATACATAACTGTGTTTGATATCTAGCGAGACCGTTGTATAAAATCCTTGGCAACGCAATAAAACAGACGTTTTAGAAATTCATTCCCCAGCTAATAAACTGGAAACGAGAACAATCATGGGTGAATCTCGCTAGGTCTTCAGCGCCTTCCTCTATTTGTCTCCTCTCATTTGCACTGAGATGATAGCACAGGCAAAGCAGAAAGGTCCACTAGTAGAAACAAAAGGATTTGACATCAAATCAGAGAAGTTGAAGGGAAGGGAGACAATGAGAGGATAATCCATTTAGACTATTGAGATTCACCCTTTCACCGGTTGAACGATAGAAGCACCACGATCCAGAGCTCCGGAGTGGTAAGCTTCTCTCCAGCTAATAGGCTATGTCTGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7234 True 1463 lncRNA 0.36 2 7012089 7013653

Neighbor

gene id symbol gene type direction distance location
b3gnt7 b3gnt7 coding upstream 311785 6684099 ~ 6700304 (+)
LOC110527749 armc9 coding upstream 360294 6559067 ~ 6651795 (+)
LOC110526525 LOC106613452 coding upstream 1244396 5664171 ~ 5767693 (+)
agxta LOC105025628 coding upstream 2055003 4948727 ~ 4957086 (+)
im:7152348 LOC106573986 coding upstream 3159080 3848517 ~ 3853009 (+)
alpi.1 LOC106574189 coding downstream 14897 7028550 ~ 7056518 (+)
alpi.2 LOC106574193 coding downstream 50715 7064368 ~ 7094220 (+)
ankle1 LOC106574192 coding downstream 82646 7096299 ~ 7107509 (+)
LOC118966183 NA coding downstream 316799 7330452 ~ 7331042 (+)
LOC110528450 LOC106574163 coding downstream 400960 7414613 ~ 7550394 (+)
G5786 NA non-coding upstream 35422 6976249 ~ 6976667 (+)
G5780 NA non-coding upstream 42215 6969540 ~ 6969874 (+)
G5774 NA non-coding upstream 45105 6966770 ~ 6966984 (+)
G5713 NA non-coding upstream 88094 6923751 ~ 6923995 (+)
G5712 NA non-coding upstream 89442 6922273 ~ 6922647 (+)
G5822 NA non-coding downstream 18331 7031984 ~ 7084536 (+)
G5820 NA non-coding downstream 44488 7058141 ~ 7062174 (+)
G5846 NA non-coding downstream 94455 7108108 ~ 7108385 (+)
G5847 NA non-coding downstream 96075 7109728 ~ 7109940 (+)
G5849 NA non-coding downstream 97867 7111520 ~ 7192013 (+)
G5581 NA other upstream 200468 6810994 ~ 6811621 (+)
G5276 NA other upstream 493900 6517482 ~ 6518189 (+)
G3597 NA other upstream 2155024 4856525 ~ 4857065 (+)
G3596 NA other upstream 2155841 4854521 ~ 4856248 (+)
G3351 NA other upstream 2570181 4439966 ~ 4441908 (+)
G6434 NA other downstream 711393 7725046 ~ 7725609 (+)
G6518 NA other downstream 871738 7885391 ~ 7885907 (+)
G6807 NA other downstream 1022964 8036617 ~ 8037154 (+)
LOC110501328 LOC106574178 other downstream 1215644 8229189 ~ 8231566 (+)
LOC110505168 LOC106574179 other downstream 1241489 8255142 ~ 8271732 (+)

Expression


Co-expression Network