Gene
RNA
| Item | Value |
|---|---|
| gene id | G5820 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 7058141 ~ 7062174 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative protein in rps4-rps11 intergenic region |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU7244 | True | 3330 | lncRNA | 0.43 | 2 | 7058141 | 7062174 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| alpi.1 | LOC106574189 | coding | upstream | 1623 | 7028550 ~ 7056518 (+) |
| b3gnt7 | b3gnt7 | coding | upstream | 357837 | 6684099 ~ 6700304 (+) |
| LOC110527749 | armc9 | coding | upstream | 406346 | 6559067 ~ 6651795 (+) |
| LOC110526525 | LOC106613452 | coding | upstream | 1290448 | 5664171 ~ 5767693 (+) |
| agxta | LOC105025628 | coding | upstream | 2101055 | 4948727 ~ 4957086 (+) |
| alpi.2 | LOC106574193 | coding | downstream | 2194 | 7064368 ~ 7094220 (+) |
| ankle1 | LOC106574192 | coding | downstream | 34125 | 7096299 ~ 7107509 (+) |
| LOC118966183 | NA | coding | downstream | 268278 | 7330452 ~ 7331042 (+) |
| LOC110528450 | LOC106574163 | coding | downstream | 352439 | 7414613 ~ 7550394 (+) |
| LOC110528753 | LOC106574165 | coding | downstream | 679388 | 7741562 ~ 7839951 (+) |
| G5815 | NA | non-coding | upstream | 44488 | 7012089 ~ 7013653 (+) |
| G5786 | NA | non-coding | upstream | 81474 | 6976249 ~ 6976667 (+) |
| G5780 | NA | non-coding | upstream | 88267 | 6969540 ~ 6969874 (+) |
| G5774 | NA | non-coding | upstream | 91157 | 6966770 ~ 6966984 (+) |
| G5713 | NA | non-coding | upstream | 134146 | 6923751 ~ 6923995 (+) |
| G5846 | NA | non-coding | downstream | 45934 | 7108108 ~ 7108385 (+) |
| G5847 | NA | non-coding | downstream | 47554 | 7109728 ~ 7109940 (+) |
| G5849 | NA | non-coding | downstream | 49346 | 7111520 ~ 7192013 (+) |
| G5867 | NA | non-coding | downstream | 77367 | 7139541 ~ 7140409 (+) |
| G5868 | NA | non-coding | downstream | 78388 | 7140562 ~ 7141294 (+) |
| G5581 | NA | other | upstream | 246520 | 6810994 ~ 6811621 (+) |
| G5276 | NA | other | upstream | 539952 | 6517482 ~ 6518189 (+) |
| G3597 | NA | other | upstream | 2201076 | 4856525 ~ 4857065 (+) |
| G3596 | NA | other | upstream | 2201893 | 4854521 ~ 4856248 (+) |
| G3351 | NA | other | upstream | 2616233 | 4439966 ~ 4441908 (+) |
| G6434 | NA | other | downstream | 662872 | 7725046 ~ 7725609 (+) |
| G6518 | NA | other | downstream | 823217 | 7885391 ~ 7885907 (+) |
| G6807 | NA | other | downstream | 974443 | 8036617 ~ 8037154 (+) |
| LOC110501328 | LOC106574178 | other | downstream | 1167123 | 8229189 ~ 8231566 (+) |
| LOC110505168 | LOC106574179 | other | downstream | 1192968 | 8255142 ~ 8271732 (+) |
