G6132


Basic Information

Item Value
gene id G6132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7105697 ~ 7107496 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU7621
AAGAACATCCTAACACACAACGAAGAAAAAGAATGCTACATTGACGAAATAGTCTATAGACAGTTGAAAGATTCTGTGGATGAGATGATTCGAACACGTAAACTTCTGCCAGTTTGACATAGCACAACCAGCATAGGCATATAGCTAATGATATTGACATTTGTTTGGAAACTTCATTTTAACTATGCATTTATCAGATCACTTGTTAAAAGGGGGAATAGTTAAATCAAGTTAATCTGTAATTGATTTGACCGAGGTAAATAACGAAATCCTCGAAACGTGTGTAAAAGTGTTTTTCCTTCCACCCAGTGTTTTGACCATAGACATACATTGGTTGTGACACGATTATTTTTCCTTTAGTGCTTTCATTCTGGTGGTAGACTTTATCTACAAATACATACATAATGATCATACTACTAACAATACAAGCCTAATGGTTTTCCTGCTAAAGAAATACATGTATCTGCATCATATTTAATGGACGTACATATATAACTGATGCTAAGGTAAGTGAACAAGCTTTCAATATCAGTCTTTCTTCCAATGActcattctgtctctttctcaatTCATCACCTTTCTCTTCGGCTCCTTCTAAAAACATATTGGAGAAGAAGGACCGACAGGCGGGACCTTGGAATTTCTCTTCCAATGAGGTTGAGAAGAAGGTCCGACAGGCGGGACCTTGGAACTTCTCTTCCAATGAGGTTGAGAAGAAGGTCCGACAGGCGGGACCTTGGAATTTCTCTTCCAATGAGGTTGAGAAGAAGGTGAGGAGATGGGATtagagaaggaggcgaggagatgAGATTAGAGAAGGAAGCGAGGAGATGGGATtagagaaggaggcgaggagatgAGATTAGAGAAGGAAGCGAGGAGATGGGATtagagaaggaggcgaggagatgGGATtagagaaggaggtgaggagattGGAGAACTGACAGAAAGGTGAAATGACAACCATTAGAGCTCcaaggtgaatctggttgagccTAGGTATGACATGGacacaaaaaaatgtatagaAAAATAACCTATATCTTGGTCCCGTGTTCCAACAAGCCAATCTTTCTACATCAATAAGTAAAACATTTACACTTTAAAAGGCCCAGTACAGTCAAAAATGTGGTTTCCCTGTGTTTTATTAACTTCCCACACTATGAGCTTGaaataatattgtgaaaattatgataatacccttttagtgtaagagctgtttgaaatcGACCgtctgaaatgtcagcctgttttggtgggatggagttttggtaaCATCAACAGGCATCAACAAGCTGTAAATTTGAACATTTTCAATGTtcctctccccactcagaccactcctagACAGTCCtatcaaaattcttgcttgagaaattgctctttgtcTAAGAAGTTATTTTTGTTCCTTTTTtaacaattttaattgaaaacaaatcaTAATAAAGGTACTTAATTATtactcagaaatgatttgatattgagataaaaacagctgcaatGGACCTTTAAGCCCAAGTTTCGTCTGAATGGAGTAAACTAGTCAACACCTTGTTCAATAAATGCTTTCATTTTCTGTTGGTGCAGTACCCAACTCTACCCACTGGGGGGCACTACTGTCCCACCCTGATATCAGGAGGTCTGAgctgcctctctccctcagccaGGAAGATCTGCATGGCCCTGTAGAGCAGGTGCACCCCcagctccctcttcctcttcaacTGCCACGTGGACACCACCCCG

Function

NR:

description
uncharacterized protein LOC109889014 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7621 True 1749 lncRNA 0.49 2 7105697 7107496

Neighbor

gene id symbol gene type direction distance location
LOC110528129 nppc coding downstream 325818 6774389 ~ 6779879 (-)
LOC110528054 NA coding downstream 345149 6757914 ~ 6760548 (-)
LOC118966762 NA coding downstream 357566 6748011 ~ 6748131 (-)
LOC118966755 NA coding downstream 357987 6747638 ~ 6747710 (-)
LOC118966756 NA coding downstream 358842 6746783 ~ 6746855 (-)
LOC110531419 LOC106574164 coding upstream 597315 7704811 ~ 7727531 (-)
ddx59 ddx59 coding upstream 622097 7729593 ~ 7739189 (-)
dynlt2b tctex1d2 coding upstream 1032672 8140168 ~ 8147503 (-)
LOC118965595 NA coding upstream 1069785 8177281 ~ 8182131 (-)
LOC110529671 rubcn coding upstream 1167142 8274638 ~ 8341087 (-)
G6124 NA non-coding downstream 9736 7095652 ~ 7095961 (-)
G6123 LOC106574193 non-coding downstream 11299 7093170 ~ 7094398 (-)
G6099 NA non-coding downstream 20325 7032696 ~ 7085372 (-)
G6074 NA non-coding downstream 72167 6983924 ~ 7033530 (-)
G6134 NA non-coding upstream 2115 7109611 ~ 7110005 (-)
G6133 NA non-coding upstream 4786 7112282 ~ 7112561 (-)
G6138 NA non-coding upstream 5657 7113153 ~ 7161382 (-)
G6219 NA non-coding upstream 176435 7283931 ~ 7285150 (-)
G6257 NA non-coding upstream 244089 7351585 ~ 7354548 (-)
G5487 NA other downstream 355661 6740509 ~ 6750036 (-)
mfsd8l1 LOC106574194 other downstream 554351 6537498 ~ 6551510 (-)
G4804 NA other downstream 1087621 6016822 ~ 6018076 (-)
G3862 NA other downstream 2148625 4948683 ~ 4957072 (-)
LOC110486761 kif1a other downstream 2338558 4751406 ~ 4921256 (-)
G6347 NA other upstream 406615 7514111 ~ 7517821 (-)
G6706 NA other upstream 776847 7884343 ~ 7885000 (-)
G6810 LOC107579696 other upstream 931683 8039179 ~ 8039463 (-)
G7184 LOC100135997 other upstream 1056780 8164276 ~ 8183933 (-)

Expression


Co-expression Network