G6138


Basic Information

Item Value
gene id G6138
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7113153 ~ 7161382 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU7628
AGAACCGAGTCCGGCGCGGCAGGACGTCAACGACAGCGCAACAATTATTAGGTATGAAGACAAGTTTTCAAGGGACCAGACACATTTTCGAATGGACTGACTGTTGGCAGCGGAAATTCTTGAGCCGTACGATACTATGAGTCATCTTCAGTCATCATCTTCTAAAATGAACCGCTATCAGAAAGCGGACaggaaaatggagagagagagagaaggagaggatgaagagaagTGGCCCGAAGGAATGGAAGAAGCCCCAGAGCagaaccagagggagggagggataactGCTGTGACATGAACGAGTGATAGAGCCAGAGGACAAGACCAGGGGCAAGAAGAGACCGTCTGCATTCACTGCCACGCCTTTCGTCTCTCTACACACTTTTTCAACACGGGGCGCAATTATGAAACGGGTTTCAGTCATTGAAGTAGAATGTAACAACAAGAAAAAAAGGAATTGTGTCTTCTGGGAAACATTAAATCGCCATCCTCTGTCTGAACAGTGACTTGAGATATGAGGGATAATGGCTGTGTCTTTGTAGTGTCCTTCTtgctctcagagagagagagagagagagaggaaatgataGGCCCAGTCGCCCACTGTGCTCATCTCTCTGAATCTCCAAGCGTCAGACTGTCAACCTTGCTCACTATCAGCCCCCGTTCGCCCCG
>TU7629
AGAACCGAGTCCGGCGCGGCAGGACGTCAACGACAGCGCAACAATTATTAGGTATGAAGACAAGTTTTCAAGGGACCAGACACATTTTCGAATGGACTGACTGTTGGCAGCGGAAATTCTTGAGCCGTACGATACTATGAGTCATCTTCAGTCATCATCTTCTAAAATGAACCGCTATCAGAAAGCGGACaggaaaatggagagagagagagaaggagaggatgaagagaagTGGCCCGAAGGAATGGAAGAAGCCCCAGAGCagaaccagagggagggagggataactGCTGTGACATGAACGAGTGATAGAGGTAAGAGCCCTGAGGTCAAATGGAGCCTTGTGTAGTAGGGAGAGGGACTTGTCATTTAAAATCTTAACAGTGATGTTAGGTAAGTCAATTTTGTGGAGCAGggctttgtaaacaaaaagggTGTAATGATGTGATCTATGTAACTTTAAAATGGCCCAGACAACCTTTTTGGTAAATAATTACAGTGATAAGTAATACAACTGTCTTCTGTGATTAAACAAAGGGCTCTATGAAAAACAACATCTAAGGGTTTAAGAATAGAGGCAGCTGCACTTTGATAAATAGTATCTCCATAATCAAGAACAGGTAGATGGTTTGACTGCACAATCTGCTTCCTggtgaaccagagagagacaagatctctatgtaaaaaaataaaataaaaaataaaaaaatttttaaaaataattcttggcgcacccatcccgttagcgggatcattttcgtcaacattcgctgaattgcagagcgtcaaattaaattactaaaattatttaattttcatgaaatcacaagtgcaatacagcaAAGCACAATtgagcttgttgttaatccacctggcgtgtcagacttcaaaaaagctttacagcaaaagctatccaagcgtttgttaggacatctctctcagcagacaaaacattacaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7628 False 678 lncRNA 0.50 3 7113153 7161382
TU7629 True 961 lncRNA 0.41 2 7143160 7161382

Neighbor

gene id symbol gene type direction distance location
LOC110528129 nppc coding downstream 333274 6774389 ~ 6779879 (-)
LOC110528054 NA coding downstream 352605 6757914 ~ 6760548 (-)
LOC118966762 NA coding downstream 365022 6748011 ~ 6748131 (-)
LOC118966755 NA coding downstream 365443 6747638 ~ 6747710 (-)
LOC118966756 NA coding downstream 366298 6746783 ~ 6746855 (-)
LOC110531419 LOC106574164 coding upstream 543429 7704811 ~ 7727531 (-)
ddx59 ddx59 coding upstream 568211 7729593 ~ 7739189 (-)
dynlt2b tctex1d2 coding upstream 978786 8140168 ~ 8147503 (-)
LOC118965595 NA coding upstream 1015899 8177281 ~ 8182131 (-)
LOC110529671 rubcn coding upstream 1113256 8274638 ~ 8341087 (-)
G6133 NA non-coding downstream 592 7112282 ~ 7112561 (-)
G6134 NA non-coding downstream 3148 7109611 ~ 7110005 (-)
G6132 NA non-coding downstream 5657 7105697 ~ 7107496 (-)
G6124 NA non-coding downstream 17192 7095652 ~ 7095961 (-)
G6123 LOC106574193 non-coding downstream 18755 7093170 ~ 7094398 (-)
G6219 NA non-coding upstream 122549 7283931 ~ 7285150 (-)
G6257 NA non-coding upstream 190203 7351585 ~ 7354548 (-)
G6337 NA non-coding upstream 333355 7494737 ~ 7582145 (-)
G6384 NA non-coding upstream 422123 7583505 ~ 7584057 (-)
G6622 NA non-coding upstream 539464 7700846 ~ 7701049 (-)
G5487 NA other downstream 363117 6740509 ~ 6750036 (-)
mfsd8l1 LOC106574194 other downstream 561807 6537498 ~ 6551510 (-)
G4804 NA other downstream 1095077 6016822 ~ 6018076 (-)
G3862 NA other downstream 2156081 4948683 ~ 4957072 (-)
LOC110486761 kif1a other downstream 2346014 4751406 ~ 4921256 (-)
G6347 NA other upstream 352729 7514111 ~ 7517821 (-)
G6706 NA other upstream 722961 7884343 ~ 7885000 (-)
G6810 LOC107579696 other upstream 877797 8039179 ~ 8039463 (-)
G7184 LOC100135997 other upstream 1002894 8164276 ~ 8183933 (-)

Expression


Co-expression Network