G6257



Basic Information


Item Value
gene id G6257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 7351585 ~ 7354548 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU7752
ggggcatttctatgttttcggcctagtatggttctcaatcagaggcaggtgtcattagttgtctctgattgagaatcatacttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtcactgtgtttgttgtcacaggataggctgtataggttttcacgttccgtttgttgttttgtagatttgagttatttcatgtatcgttcagttttccattaaagaacatgaataaccaccatgctgctttttggtccgcttctcctcctacagacgaacgtcgttacaatgttgtcgttcagccacgactttgTGAAGC
>TU7753
ggggcatttctatgttttcggcctagtatggttctcaatcagaggcaggtgtcattagttgtctctgattgagaatcatacttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtcactgtgtttgttgtcacaggataggctgtataggttttcacgttccgtttgttgttttgtagatttgagttatttcatgtatcgttcagttttccattaaagaacatgaataaccaccatgctgctttttggtccgcttctcctcctacagacgaacgtcgttacaatgttgtcgttcagccacgactttgTGAAGC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU7752 False 326 lncRNA 0.37 2 7351585 7354548
TU7753 True 326 lncRNA 0.39 2 7351585 7354548

Neighbor


gene id symbol gene type direction distance location
LOC110528129 nppc coding downstream 571706 6774389 ~ 6779879 (-)
LOC110528054 NA coding downstream 591037 6757914 ~ 6760548 (-)
LOC118966762 NA coding downstream 603454 6748011 ~ 6748131 (-)
LOC118966755 NA coding downstream 603875 6747638 ~ 6747710 (-)
LOC118966756 NA coding downstream 604730 6746783 ~ 6746855 (-)
LOC110531419 LOC106574164 coding upstream 350263 7704811 ~ 7727531 (-)
ddx59 ddx59 coding upstream 375045 7729593 ~ 7739189 (-)
dynlt2b tctex1d2 coding upstream 785620 8140168 ~ 8147503 (-)
LOC118965595 NA coding upstream 822733 8177281 ~ 8182131 (-)
LOC110529671 rubcn coding upstream 920090 8274638 ~ 8341087 (-)
G6219 NA non-coding downstream 66435 7283931 ~ 7285150 (-)
G6138 NA non-coding downstream 190203 7113153 ~ 7161382 (-)
G6133 NA non-coding downstream 239024 7112282 ~ 7112561 (-)
G6134 NA non-coding downstream 241580 7109611 ~ 7110005 (-)
G6132 NA non-coding downstream 244089 7105697 ~ 7107496 (-)
G6337 NA non-coding upstream 140189 7494737 ~ 7582145 (-)
G6384 NA non-coding upstream 228957 7583505 ~ 7584057 (-)
G6622 NA non-coding upstream 346298 7700846 ~ 7701049 (-)
G6625 NA non-coding upstream 356006 7710554 ~ 7710826 (-)
G6600 NA non-coding upstream 373832 7728380 ~ 7729466 (-)
G5487 NA other downstream 601549 6740509 ~ 6750036 (-)
mfsd8l1 LOC106574194 other downstream 800239 6537498 ~ 6551510 (-)
G4804 NA other downstream 1333509 6016822 ~ 6018076 (-)
G3862 NA other downstream 2394513 4948683 ~ 4957072 (-)
LOC110486761 kif1a other downstream 2584446 4751406 ~ 4921256 (-)
G6347 NA other upstream 159563 7514111 ~ 7517821 (-)
G6706 NA other upstream 529795 7884343 ~ 7885000 (-)
G6810 LOC107579696 other upstream 684631 8039179 ~ 8039463 (-)
G7184 LOC100135997 other upstream 809728 8164276 ~ 8183933 (-)

Expression



Co-expression Network